DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and sepsecs

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_956448.1 Gene:sepsecs / 393123 ZFINID:ZDB-GENE-040426-859 Length:490 Species:Danio rerio


Alignment Length:435 Identity:84/435 - (19%)
Similarity:131/435 - (30%) Gaps:152/435 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 REGVRLAQKFEALVLADHRFELPAKRHLGLV--VFRIRGD--------------NEITEK----L 422
            ||| |:|.            .|.|:||..|:  :.| .||              |:||..    :
Zfish    75 REG-RVAS------------SLVARRHYRLIHGIGR-SGDIAAVQPKAAGSSLLNKITNSVVLDV 125

  Fly   423 LKRLNHRGNLHC--IPSSL----------------KGQYVIRFTITSTHTTLDDIVKDWMEIRQ- 468
            ||....|....|  :|.:.                |.:|::                 |..|.| 
Zfish   126 LKLTGVRSVSSCFVVPMATGMSLTLCFLTLRHRRPKARYIL-----------------WPRIDQK 173

  Fly   469 --------------VASTVLEEMNITISNRVYLKETKEKNEAFGSSLLL----SNSPLSPKVVN- 514
                          |...|||...:    |..|:|.:.|.|.||:...|    :.|..:|:|.: 
Zfish   174 SCFKSMVTAGFEPVVIENVLEGDEL----RTNLEEVERKIEEFGAENTLCVHSTTSCFAPRVPDR 234

  Fly   515 ----GSFAAIFDADEFLAKTYA------------GVRIAHQES--PSMRRR----VRGILMSG-- 555
                ....|..|....:...|.            |.|:...::  .|:.:.    |.|.:::|  
Zfish   235 LEELSVLCAKHDIPHIVNNAYGVQPSKCMHLIQQGARVGRIDAFVQSLDKNFVVPVGGAIIAGFD 299

  Fly   556 KQF------------SLDSHMDVVVQTTLDAGNGATR--TSTTNSYGHTTSAAQANSERQASIQE 606
            :.|            |....:||::.......||..:  ......|||......|.:.|......
Zfish   300 ENFIQEISKIYPGRASASPSLDVLITLLTLGANGYKKLLADRKELYGHLAQELSALAARHGERLL 364

  Fly   607 DNEESPEETELLSLCRTSNVPSPEHAHSLSTPSRSCSSSSHSLIHSLTQSSPRSSPVNQFRPI-- 669
            ....:|     :||..:.|        .|...|.|..:...|::.:...|..|..|:...:.:  
Zfish   365 KTPHNP-----ISLAMSLN--------HLEAHSSSAVTQLGSMLFTRQVSGARVVPLGVQQTVSG 416

  Fly   670 -TLCAVPSQSQLSMPLAMPLPNRNVTVSVDSLLNPVTTCNVYHGK 713
             |.....|.|:     |.|.|..|...::......||.|....||
Zfish   417 HTFSGFMSHSE-----AYPCPYLNAASAIGITKGDVTVCMKRLGK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 11/36 (31%)
sepsecsNP_956448.1 Tetramerization. /evidence=ECO:0000250|UniProtKB:Q9HD40 1..44
selenium_SpcS 12..458 CDD:211833 84/435 (19%)
Phosphate loop (P-loop). /evidence=ECO:0000250|UniProtKB:Q9HD40 96..106 3/10 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..490
Blue background indicates that the domain is not in the aligned region.

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