DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and amd

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster


Alignment Length:481 Identity:231/481 - (48%)
Similarity:323/481 - (67%) Gaps:3/481 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVM 65
            ||.||:|:.||..:|||||||||||:..|.|:|.|||:..|||...|.|.|.|..:..|:.|::.
  Fly     1 MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISRVIK 65

  Fly    66 PGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPD 130
            ||:|||||||||||:|...|.||::|:|||.....:||:|..||||||||::||:||.|.:.||.
  Fly    66 PGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPA 130

  Fly   131 AFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSS 195
            .|.| :|...||||:|.:||||.||.:||.|.:|:..:.|.||...::|:..|||||.|||::|.
  Fly   131 HFQH-ASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSC 194

  Fly   196 VEKAALIGLVRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGI 260
            :|||.::..:.:|.:.|.:|..:||..||.|||:|:..|.:|....|||||||:|::|::|.:..
  Fly   195 IEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSA 259

  Fly   261 VCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVHR 325
            ||.|..:||||||||||.||...|.....:|::|.||:.||..|:::|:||.:|:|:||:..|..
  Fly   260 VCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVD 324

  Fly   326 TFNVEPLYLQHENSGVA--VDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFE 388
            :|||:.:||:|::.|.:  .||.||||||.|||||||||...|:.|.:||:.|:|:.:.||::||
  Fly   325 SFNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFE 389

  Fly   389 ALVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTH 453
            .|||.|.||||.|.|.||||.||.:||||||.:||:||..|..::.:.:...|:..:||.:....
  Fly   390 QLVLKDSRFELVAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMD 454

  Fly   454 TTLDDIVKDWMEIRQVASTVLEEMNI 479
            |...||...|.||....:.:..|.::
  Fly   455 TKASDIDFAWQEIESQLTDLQAEQSL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 189/379 (50%)
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 189/379 (50%)

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