DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hdc and CG1486

DIOPT Version :9

Sequence 1:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_608450.1 Gene:CG1486 / 33108 FlyBaseID:FBgn0031174 Length:852 Species:Drosophila melanogaster


Alignment Length:943 Identity:188/943 - (19%)
Similarity:303/943 - (32%) Gaps:298/943 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LENIRERRVFPDVSPGYMRQLLPESA-PIEGEPWPKIFSDVERIVMPGITHWQSPHMHAYFPALN 84
            |||::       ||      ..|||. |:|.|.     ...||:....:           .||.:
  Fly    56 LENVK-------VS------TTPESPNPVENEE-----EAGERVTSEDL-----------LPAKH 91

  Fly    85 SMPSLLGDMLADAINCLGFTWASS------PACTELEIIVM------------------------ 119
            .:||   |:|......:.:|.:..      ||..::..:.:                        
  Fly    92 RVPS---DILKSLEQLVSYTDSDDDPEFPLPALDDVSHLALISHSIVAYLSHLDRQQLLRVTNSI 153

  Fly   120 -----NWLGKMIGLPDAFLHLSSQ---SQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQ 176
                 .|||.:.    .|.|.:|.   .....||:|........|                |||.
  Fly   154 SGDATRWLGTLF----HFAHPASSFHADNADAVLRTVRLAIVARC----------------PGYL 198

  Fly   177 DAEIN--ARLVAYCSD-----QAHSSVEKAALIGLVRMRYI-EADDDLAMRGKLLREAIEDDIKQ 233
            :..|.  |:...|.|:     :.|.:..:.. |.|..::.| |......|...||::.|:.|:..
  Fly   199 EGGIPALAQPTFYISENTTPMRLHYACRQLG-IPLEAIKVIPEHSQSGTMDVTLLQKQIQQDVGN 262

  Fly   234 GLVPFWVCATLGTTGSCSF-DNLEEIGIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADS 297
            ...|..|.|.:|.: .|.: |||..:..||..|::|||. :.:..:|.:|.:.:..:.  |...|
  Fly   263 NRTPLLVVADIGAS-LCGYVDNLLRLRDVCKAHNMWLHA-SGHGLAALVCAQNQGHVE--EVLHS 323

  Fly   298 IAFNPSKWLMVHFDATALWVRDSTAVHRTFNVEPLYLQH---ENSGVAVDFMHWQIPLSRRFRAL 359
            :|.|...||.|    .:|               |:.|.|   :||.::. |....| ||||..||
  Fly   324 MALNLGSWLGV----PSL---------------PIVLLHRPLQNSALSA-FESDPI-LSRRLNAL 367

  Fly   360 KVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLK 424
            .:|..|::.|.|.:..      ||...|:...:.   ||:.:|         ..|        ::
  Fly   368 SLWTSLQALGRKAIAE------RLHVAFQTCSIL---FEIASK---------CEG--------IR 406

  Fly   425 RLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIR---QVASTVLE---EMNITI-- 481
            .|:|      .|.:            .|..:|.|:::...:::   ..|:.|:.   :.:.||  
  Fly   407 VLSH------TPGA------------QTGASLSDVIQSPFDVQALFDAAAPVVAYQFDGSTTIPL 453

  Fly   482 --SNRVYLKETKEKNEAFGSSLLLSNSPLSP--KVVNGSF---------------AAIFDADEFL 527
              |.........|:..|.|         |.|  |:.|.|:               ...||.:...
  Fly   454 GGSGSSAAAAAAERETAEG---------LKPLEKINNASYFDRLNSWLGQILQRDCPNFDFEVIE 509

  Fly   528 AKT------YAGVRIAHQESPSMRRRVRGILMSGKQFSLDSHMDVVVQTTLD------------- 573
            ..|      |..:.:...|.|.....:.....     ||::|:|::..|...             
  Fly   510 HPTHGSCIRYCPLELGLGEQPPSSENLESFAQ-----SLEAHVDILRATIKHKARFIHLVECSDV 569

  Fly   574 ---------AGNGATR--------------TSTTNSYGHTTSAAQANSERQASIQEDNE------ 609
                     ||.|..|              .:..|........|..:::...|:.|..:      
  Fly   570 LRLVPLPEWAGMGGVRFVPEGWESLLTDQAKTELNKLNIDLVEALKSTDNAFSLGEGTDGLICVR 634

  Fly   610 -----ESPEETELLSLCRTSNVPSPEHAHSLSTPSRSCSSSSHSLIHSLTQSSPRSSPVNQFRPI 669
                 ...|..|||.|..|......|::..|.|.|......    |.::|....|.|....::..
  Fly   635 FGMVTHETEVEELLDLVVTVGKSVQENSRVLDTMSEIVKKG----IEAVTADLQRESEEKLWQEG 695

  Fly   670 TLCAVPSQSQLSMPLAMPLPNRNVTVSVDSLLNPV--TTCNVYHGKRFLEPLENLA-QTSASFSS 731
            .|..||...::....:.|.....:.....:|...|  :|.|:|  |..::.....| |..|:.|.
  Fly   696 ILRHVPVVGRVFNWWSPPAKESGIKGRSLNLTQGVVESTENIY--KYHMQMTGATAHQLPANRSP 758

  Fly   732 SIFRLPTP-IATPTRESPEDPDWPAKTFSQLLLERYSSQSQSLGNNSST--ESSSLSG------G 787
                 ||| :.||.......|.:|.       :|.........|.:..|  :|...||      |
  Fly   759 -----PTPMVQTPVVAPALPPVFPT-------VEPVPGNGNGSGASEGTPVQSGEASGSMPAASG 811

  Fly   788 ATPTPTP-MSSLDELVTPLLLSFASPSQPMLSA 819
            |.|:..| .:.:|...|....|.||.:.|.|.|
  Fly   812 AAPSAAPTQNHVDHARTVSQSSAASSTVPELVA 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 91/428 (21%)
CG1486NP_608450.1 AAT_I 159..>384 CDD:302748 68/276 (25%)
WWbp <725..801 CDD:304964 21/89 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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