DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and HDC

DIOPT Version :9

Sequence 1:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:XP_016877583.1 Gene:HDC / 3067 HGNCID:4855 Length:697 Species:Homo sapiens


Alignment Length:511 Identity:294/511 - (57%)
Similarity:373/511 - (72%) Gaps:35/511 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVM 65
            |:.:|||:||:||||||..||..:|||||.|||.|||:|..||||||.:.:.|..||.|:|||:|
Human     2 MEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIM 66

  Fly    66 PGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPD 130
            ||:.||||||||||:|||.|.|||||||||||||||||||||||||||||:.||:||.||:|||:
Human    67 PGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPE 131

  Fly   131 AFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSS 195
            .|||....||||||||:|.||:||:.|||.|...|.......|...::.:|||||||.|||||||
Human   132 HFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSS 196

  Fly   196 VEKAALIGLVRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGI 260
            ||||.||.||:|:::..||:.::||:.|::|||:|.::||||.:|||||||||.|:||.|.|:|.
Human   197 VEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGP 261

  Fly   261 VCAEHH-----------------------------------LWLHVDAAYAGSAFICPEFRTWLR 290
            :...||                                   ||||:||||||:||:|||||.:|:
Human   262 ISKAHHPCSPPLSLARCETSFPTSYLPSGQVMFASSGAREGLWLHIDAAYAGTAFLCPEFRGFLK 326

  Fly   291 GIERADSIAFNPSKWLMVHFDATALWVRDSTAVHRTFNVEPLYLQHENSGVAVDFMHWQIPLSRR 355
            |||.|||..||||||:|||||.|..||:|...:.:||:|.|:||:|.|||||.||||||||||||
Human   327 GIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRR 391

  Fly   356 FRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITE 420
            ||::|:|||:||:|:|.||.|:|.|..:|:.||:||..|..||:||||||||||||::|.|.:||
Human   392 FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLTE 456

  Fly   421 KLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQVASTVLEE 476
            .:||.:...|.|..||::::.:.:||||:||..||.|||::||..||..|:.:|.:
Human   457 NVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQ 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 245/412 (59%)
HDCXP_016877583.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158059
Domainoid 1 1.000 531 1.000 Domainoid score I278
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20490
Inparanoid 1 1.050 635 1.000 Inparanoid score I834
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - oto90928
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - LDO PTHR11999
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9928
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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