DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and Sepsecs

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_766078.1 Gene:Sepsecs / 211006 MGIID:1098791 Length:504 Species:Mus musculus


Alignment Length:227 Identity:55/227 - (24%)
Similarity:88/227 - (38%) Gaps:53/227 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 MRGKLLR---EAIEDDIKQGLVPFWVCATLGTTGSCSF----DNLEEIGIVCAEHHLWLHVDAAY 275
            :.|..||   :|:|..| |.|.|..:.. |.:|.:|..    |.|||:.::||.:.:...|:.||
Mouse   193 LEGDELRTDLKAVEAKI-QELGPEHILC-LHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAY 255

  Fly   276 AGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVHRTFNVEPLYLQHENSG 340
            ...:..|.........:.|.|:...:..|..||....         |:...|| || ::|     
Mouse   256 GLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGG---------AIIAGFN-EP-FIQ----- 304

  Fly   341 VAVDFMHWQIPLSRRF--RA-----LKVWFVLRSYGIKGLQRHIREG----VRLAQKFEALVLAD 394
                      .:|:.:  ||     |.|...|.|.|..|.::.::|.    |.|:.:.:.|..| 
Mouse   305 ----------DISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEA- 358

  Fly   395 HRFELPAKRH----LGLVVFRIRG--DNEITE 420
            |...|....|    |.:.:..|.|  |..:|:
Mouse   359 HNERLLQTPHNPISLAMTLKTIDGHHDKAVTQ 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 51/216 (24%)
SepsecsNP_766078.1 Tetramerization. /evidence=ECO:0000269|PubMed:18093968 1..44
selenium_SpcS 13..458 CDD:211833 55/227 (24%)
Phosphate loop (P-loop). /evidence=ECO:0000269|PubMed:18093968 96..106
Blue background indicates that the domain is not in the aligned region.

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