DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and hdl-1

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_502265.2 Gene:hdl-1 / 178129 WormBaseID:WBGene00001839 Length:905 Species:Caenorhabditis elegans


Alignment Length:461 Identity:188/461 - (40%)
Similarity:275/461 - (59%) Gaps:13/461 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVM 65
            |...::|...|::|||:....|:||..|..|.:.|||::.|||..||.:.|....|..|..::::
 Worm   343 MSRDQFRNAAKKVVDYLMKQDESIRAARCSPALKPGYLKALLPPKAPQKAEDIDDILEDYHKLIV 407

  Fly    66 PGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPD 130
            ||::|...|:.|:::||.||...||.|:|...|...||.|.|:||.||||:::|:|||:|:.||.
 Worm   408 PGLSHSSHPNFHSFYPAGNSFHCLLADLLGGHIGDAGFYWTSNPALTELEVLMMDWLGEMMALPK 472

  Fly   131 AFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSS 195
            .||.....|:|||.:|.:.:|:..:.|:|.||..|:|..:|....:.::|.||||||.|..|..|
 Worm   473 EFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRLRSSDILARLVAYTSSDARRS 537

  Fly   196 V--EKAALIGLVRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEI 258
            :  :.||.:.:|:||.:..|.:..:||..|..||..||::||:||:|.|..||:|.||||:|.|:
 Worm   538 IKMKMAAEVAMVKMRVLPTDQNFILRGDTLHAAIMADIERGLIPFFVGANFGTSGPCSFDHLHEL 602

  Fly   259 GIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAV 323
            |.||.||..||||||||||:|.||||.|..:|||:.|||....|||.::...|...|||||.   
 Worm   603 GPVCREHGTWLHVDAAYAGTALICPEIRGLMRGIDWADSFCTTPSKLIIAVCDVCCLWVRDR--- 664

  Fly   324 HRTFNVEPLYLQHENSGVAVDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFE 388
            |:        |||.:.....|.....:|.|:|..|||:||::||:|::.||..|||.:||.|...
 Worm   665 HK--------LQHASLENHPDLPFKGLPTSQRVGALKIWFMIRSFGVENLQNQIREHIRLGQVMT 721

  Fly   389 ALVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTH 453
            .::..|.|||:..|..:||:.||.:.::...:.||.|.|..||:......|:.::|||..|.|..
 Worm   722 KILQKDLRFEVCNKVVMGLICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK 786

  Fly   454 TTLDDI 459
            .:.:|:
 Worm   787 CSEEDL 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 164/379 (43%)
hdl-1NP_502265.2 Pyridoxal_deC 377..746 CDD:395219 164/379 (43%)

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