DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and bas-1

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_001021151.1 Gene:bas-1 / 175778 WormBaseID:WBGene00000239 Length:523 Species:Caenorhabditis elegans


Alignment Length:515 Identity:202/515 - (39%)
Similarity:294/515 - (57%) Gaps:61/515 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVM 65
            ||.::.|..||:|:|::|||.:.||:|:..|||.|||:..|:|..||...|.|.|||.|:|.:|:
 Worm     1 MDSQKLRTEGKKMLDFVADYWDGIRDRKPLPDVKPGYINDLVPAQAPATPEDWAKIFDDLENVVV 65

  Fly    66 PGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPD 130
            .|.|||..||..||||...|..|::.|:|:..|..:||||.|.|:.||||:..::|:..::|||:
 Worm    66 NGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIGFTWKSCPSMTELEMSSLDWVVDLMGLPE 130

  Fly   131 AFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHER------------------------ 171
            .|.: |....|.|::|:|||::|::.::|.|...::|....                        
 Worm   131 HFKN-SHNGPGCGIIQSTASDSTMIAIMAARATHVERIKSEPTFMKWVSETGVGKTLKNIFDRVK 194

  Fly   172 ---------------------HPGYQDAEINARLVAYCSDQAHSSVEKAALIGLVRMRYIEADDD 215
                                 .|.:.|..:..|.|.||||||||||||.|::..||||.::    
 Worm   195 VNKTLVARASVTVDDEASGMITPYFHDPTVFERFVMYCSDQAHSSVEKGAMLSAVRMRKLK---- 255

  Fly   216 LAMRGKL---------LREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGIVCAEHHLWLHV 271
             |.||.|         |:.||::|..:|.:||...||:|||.||..|.::|:|.||.|..|:|||
 Worm   256 -ATRGFLGNYGVSRETLQNAIKEDRARGYIPFMFLATVGTTCSCGVDQVDELGPVCVEEGLYLHV 319

  Fly   272 DAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVHRTFNVEPLYLQH 336
            ||||||:..:|.||:..:||:|..||..||..|..||:||.:.:|.::.|.|.|.|||:.:||.|
 Worm   320 DAAYAGTFALCEEFKYLIRGMEHVDSFNFNLHKAGMVNFDCSPMWFKNGTHVSRYFNVDAVYLAH 384

  Fly   337 ENSGVAVDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPA 401
            |....|.|:.|.|:.|.||||:||:|||||:.|:..::.::|....||.:|..|:|.:.:||...
 Worm   385 EYQTTASDYRHLQVALGRRFRSLKIWFVLRNMGVDKIREYLRRTELLAAEFSKLILENGKFEHFV 449

  Fly   402 KRHLGLVVFRIRGD-NEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIV 460
            .:||||..||::.. |...|||...:|....:|.:||::.|.|.:|..:.|..||||||:
 Worm   450 PQHLGLTCFRLKNSTNADNEKLCNAINDDRRIHLVPSTVHGTYFLRMVVCSQLTTLDDII 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 168/431 (39%)
bas-1NP_001021151.1 AAT_I 35..461 CDD:450240 168/431 (39%)

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