DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and sgpl1

DIOPT Version :9

Sequence 1:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:XP_005156777.1 Gene:sgpl1 / 100037312 ZFINID:ZDB-GENE-070410-24 Length:574 Species:Danio rerio


Alignment Length:532 Identity:105/532 - (19%)
Similarity:174/532 - (32%) Gaps:186/532 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPK------IFSDVERIV-----MPGITHWQSP 74
            |:.|||.....:|:                  |.|      ::...|::.     :.|...|.:|
Zfish   124 LDKIREYETLSEVN------------------WAKGKVSGAVYWGDEKLTDLLVKVYGEFAWTNP 170

  Fly    75 HMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQS 139
            .....||.:..|                          |.|::.|. .....|.||:.       
Zfish   171 LHPDIFPGVRKM--------------------------EAEVVRMT-CALFNGGPDSC------- 201

  Fly   140 QGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSSVEKAALIGL 204
               |.:.:..:|:.|:...|.|..|    |||  |.:..||.|.:      ..|::.:|||....
Zfish   202 ---GTVTSGGTESILMACKAYRDMA----HER--GIKHPEIIAPI------SVHAAFDKAAHYFG 251

  Fly   205 VRMRYIEADD-DLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCS--------FDNLEEIGI 260
            :::.::..|: .:.:..|.:|.||..:... ||             ||        .|.:||:..
Zfish   252 MKLIHVPLDNKTMKVDVKAMRRAITKNTAM-LV-------------CSAPQFPHGIMDPVEEVAK 302

  Fly   261 VCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVHR 325
            :..::::..||||...|...:.         :|:|.        :.:..||.....|...:|...
Zfish   303 LAVKYNIPFHVDACLGGFLIVF---------MEKAG--------FKLAPFDFRVKGVTSISADTH 350

  Fly   326 TFNVEP------LY----LQHENSGVAVDFMHWQ--IPLSRRFRALK-------VWFVLRSYGIK 371
            .:...|      ||    .:|....||.|   ||  |..|......:       .|..:...|.|
Zfish   351 KYGYAPKGSSVVLYSNRKFRHYQYFVAPD---WQGGIYASPSMAGSRPGGIIAACWATMMHMGEK 412

  Fly   372 GLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITE-----------KLLKR 425
            |.....|:.|...:|.:..:          ::..|:.||   ||.|::.           :|...
Zfish   413 GYVEATRKVVETTRKIKTGI----------RKIDGVFVF---GDPEVSVVALGSDDFDIFRLSNA 464

  Fly   426 LNHRG-NLHCI--PSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQVASTVLEEMNITISNRVYL 487
            |..:| ||:.:  |||      |...:|..||...       ...|..|.|.:|:      .:.:
Zfish   465 LTSKGWNLNTLQFPSS------IHICVTMLHTQSG-------VAEQFISDVKKEV------AIIM 510

  Fly   488 KETKEKNEAFGS 499
            |..|||....|:
Zfish   511 KNPKEKTTGMGA 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 76/416 (18%)
sgpl1XP_005156777.1 DOPA_deC_like 143..504 CDD:99743 92/469 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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