DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and sgpl1

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:XP_005156777.1 Gene:sgpl1 / 100037312 ZFINID:ZDB-GENE-070410-24 Length:574 Species:Danio rerio


Alignment Length:532 Identity:105/532 - (19%)
Similarity:174/532 - (32%) Gaps:186/532 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPK------IFSDVERIV-----MPGITHWQSP 74
            |:.|||.....:|:                  |.|      ::...|::.     :.|...|.:|
Zfish   124 LDKIREYETLSEVN------------------WAKGKVSGAVYWGDEKLTDLLVKVYGEFAWTNP 170

  Fly    75 HMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQS 139
            .....||.:..|                          |.|::.|. .....|.||:.       
Zfish   171 LHPDIFPGVRKM--------------------------EAEVVRMT-CALFNGGPDSC------- 201

  Fly   140 QGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSSVEKAALIGL 204
               |.:.:..:|:.|:...|.|..|    |||  |.:..||.|.:      ..|::.:|||....
Zfish   202 ---GTVTSGGTESILMACKAYRDMA----HER--GIKHPEIIAPI------SVHAAFDKAAHYFG 251

  Fly   205 VRMRYIEADD-DLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCS--------FDNLEEIGI 260
            :::.::..|: .:.:..|.:|.||..:... ||             ||        .|.:||:..
Zfish   252 MKLIHVPLDNKTMKVDVKAMRRAITKNTAM-LV-------------CSAPQFPHGIMDPVEEVAK 302

  Fly   261 VCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVHR 325
            :..::::..||||...|...:.         :|:|.        :.:..||.....|...:|...
Zfish   303 LAVKYNIPFHVDACLGGFLIVF---------MEKAG--------FKLAPFDFRVKGVTSISADTH 350

  Fly   326 TFNVEP------LY----LQHENSGVAVDFMHWQ--IPLSRRFRALK-------VWFVLRSYGIK 371
            .:...|      ||    .:|....||.|   ||  |..|......:       .|..:...|.|
Zfish   351 KYGYAPKGSSVVLYSNRKFRHYQYFVAPD---WQGGIYASPSMAGSRPGGIIAACWATMMHMGEK 412

  Fly   372 GLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITE-----------KLLKR 425
            |.....|:.|...:|.:..:          ::..|:.||   ||.|::.           :|...
Zfish   413 GYVEATRKVVETTRKIKTGI----------RKIDGVFVF---GDPEVSVVALGSDDFDIFRLSNA 464

  Fly   426 LNHRG-NLHCI--PSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQVASTVLEEMNITISNRVYL 487
            |..:| ||:.:  |||      |...:|..||...       ...|..|.|.:|:      .:.:
Zfish   465 LTSKGWNLNTLQFPSS------IHICVTMLHTQSG-------VAEQFISDVKKEV------AIIM 510

  Fly   488 KETKEKNEAFGS 499
            |..|||....|:
Zfish   511 KNPKEKTTGMGA 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 76/416 (18%)
sgpl1XP_005156777.1 DOPA_deC_like 143..504 CDD:99743 92/469 (20%)

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