Protein Alignment Hr3 and kni

DIOPT Version :9

• Sequence 1: NP_001334718.1
• Gene: Hr3 / 36073
• FlyBaseID: FBgn0000448
• Length: 871
• Species: Drosophila melanogaster
• Sequence 2: NP_001287130.1
• Gene: kni / 40287
• FlyBaseID: FBgn0001320
• Length: 434
• Species: Drosophila melanogaster
• Alignment Length: 286
• Identity: 74/286 - (25%)
• Similarity: 110/286 - (38%)
• Gaps: 85/286 - (29%)

  Fly   437 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQKCLKL 500
            |||||:.::|.|:|..||||||.||.||.:::... :|....:|::|:.||..|:.|||:||..:
  Fly    10 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYNV 74

  Fly   501 GMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRAQSDAAP-------------DSSVYDTQTPSSS 552
            |||:...::||.|  ...|:...::.|.....|...|.|             .|.|....||...
  Fly    75 GMSKGGSRYGRRS--NWFKIHCLLQEHEQAAAAAGKAPPLAGGVSVGGAPSASSPVGSPHTPGFG 137

  Fly   553 D---QLHHNNYNSG-------------GYSN---------------NEVGYGSPY---------G 577
            |   .|||::....             ||.:               ..|.:.||:         |
  Fly   138 DMAAHLHHHHQQQQQQQVPRHPHMPLLGYPSYLSDPSAALPFFSMMGGVPHQSPFQLPPHLLFPG 202

  Fly   578 YSASVTP-----------QQTMQYDISADYVDS-TTYEPRS--TIIDPEFISHADGDINDVLIKT 628
            |.||...           |:..::..|.|.|:| ..:.|.|  .::.|  .|.|.....||.::
  Fly   203 YHASAAAAAASAADAAYRQEMYKHRQSVDSVESQNRFSPASQPPVVQP--TSSARQSPIDVCLE- 264

  Fly   629 LAEAHANTNTKLEAVHDMFRKQPDVS 654
                        |.||.:...|...|
  Fly   265 ------------EDVHSVHSHQSSAS 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr3	NP_001334718.1	None
kni	NP_001287130.1	NR_DBD_like	8..92	CDD:295381	35/83 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S5442
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.860