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Protein Alignment Hr3 and knrl
DIOPT Version :9
Sequence 1: | NP_001334718.1 |
Gene: | Hr3 / 36073 |
FlyBaseID: | FBgn0000448 |
Length: | 871 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001303368.1 |
Gene: | knrl / 40285 |
FlyBaseID: | FBgn0001323 |
Length: | 647 |
Species: | Drosophila melanogaster |
Alignment Length: | 144 |
Identity: | 49/144 - (34%) |
Similarity: | 76/144 - (52%) |
Gaps: | 23/144 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 437 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQKCLKL 500
|||||:.::|.|:|..||||||.||.||.:::.:. .|..|.:|::::.||..|:.|||:|||.:
Fly 14 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKACRLKKCLMV 78
Fly 501 GMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRAQSDAAPDSSVYDTQTPSSSDQLHHNNYNSGGY 565
|||:...::||.| :..:.|......|..|. ::...|||:..:||.
Fly 79 GMSKSGSRYGRRS--------NWFKIHCLLQEQQQQAV------------AAMAAHHNSQQAGGG 123
Fly 566 SN--NEVGYGSPYG 577
|: :..|.|.|.|
Fly 124 SSGGSGGGQGMPNG 137
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Hr3 | NP_001334718.1 |
None |
knrl | NP_001303368.1 |
NR_DBD_like |
12..96 |
CDD:295381 |
36/89 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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