Protein Alignment Hr3 and ftz-f1

DIOPT Version :9

• Sequence 1: NP_001334718.1
• Gene: Hr3 / 36073
• FlyBaseID: FBgn0000448
• Length: 871
• Species: Drosophila melanogaster
• Sequence 2: NP_524143.2
• Gene: ftz-f1 / 40045
• FlyBaseID: FBgn0001078
• Length: 1027
• Species: Drosophila melanogaster
• Alignment Length: 986
• Identity: 195/986 - (19%)
• Similarity: 307/986 - (31%)
• Gaps: 406/986 - (41%)

  Fly    12 QAKPAGGSKSSSGGPTYIGTDAATAAAVANLRSKVPSISIIPLPVSTTIVARSGSG-ASGTG-GS 74
            |.||...:.|:|     :.|....::..|.|......:......:|||.....||| |||:| ||
  Fly   236 QLKPLEVNSSTS-----VSTSNFLSSTTAQLLDFEVQVGKDDGHISTTTTTGPGSGSASGSGSGS 295

  Fly    75 GGAPPALPQLIQSSRSVSTKS-TGTSPP----LAFITEGSGTSGAP-----------ALTLLPRP 123
            |....::.:.|.::...:|.| :.|:.|    |..|.|.:.:|.||           :.:..|:.
  Fly   296 GSGSGSIARTIGTATPTTTTSMSNTANPTRSSLHSIEELAASSCAPRAASPNSNHTSSASTTPQQ 360

  Fly   124 QQQHQYQQTDKCTVLKLDVLKQQSGVAANSSSNTYLQIEQQLSELEAADEEEENMASLLGSAPPA 188
            |||.|:.              .|||   |.|.:.....::.:||.|...|.::|..
  Fly   361 QQQQQHH--------------MQSG---NHSGSNLSSDDESMSEDEFGLEIDDNGG--------- 399

  Fly   189 QILANQPIIVKIEPTQSFHIVDEGDTRVLSLPLSDADKLGASWIDLKDIAGLQAGGGATLLDVCF 253
                       .:.|.|.|....|                          |...|||..||
  Fly   400 -----------YQDTTSSHSQQSG--------------------------GGGGGGGGNLL---- 423

  Fly   254 EQANEDGTIIATVQPDLENELEAELKAEGEPEDETEPEPPAPKRLATTRPAQSRPQQQQQQQQQQ 318
                                                                             
  Fly   424 ----------------------------------------------------------------- 423

  Fly   319 VKFLSDPPALARSSSFSSLSSFSSISNISSVCKNMASNTSQEGSLKRTKERTPPPMPPLTTHKPA 383
                            :..|..||......:....||::...|:             |...|
  Fly   424 ----------------NGSSGGSSAGGGYMLLPQAASSSGNNGN-------------PNAGH--- 456

  Fly   384 ATTTATSATSAAAATSAATASATATSARENSREHSSSSSGSNGAMTAQIEIIP--------CKVC 440
                .:|.:....:..|....|...|...|....:|::.|..|      |:|.        |.||
  Fly   457 ----MSSGSVGNGSGGAGNGGAGGNSGPGNPMGGTSATPGHGG------EVIDFKHLFEELCPVC 511

  Fly   441 GDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYCRLQKCLKLGMSRD 505
            |||.||.|||::|||.|||||:|:..:...|.|...:.|.:|:..|.||.|||.||||::||..:
  Fly   512 GDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLE 576

  Fly   506 AV----------KFGRMSKKQREK----------------------------------------V 520
            ||          |||.|.|:.|.:                                        :
  Fly   577 AVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNI 641

  Fly   521 EDEVRFHRAQMRAQSDAAPDSS-----------------VYDT--------------QTPSSSDQ 554
            :.|::..:.....||   ||||                 |..|              ..|||...
  Fly   642 KQEIQIPQVSSLTQS---PDSSPSPIAIALGQVNASTGGVIATPMNAGTGGSGGGGLNGPSSVGN 703

  Fly   555 LHHNNYNSGGYSNNEVGYGSPYG------------------------------YSASVTPQQTMQ 589
            .:.:|.:|.|.:|:..|.|:..|                              :.|.:...|.
  Fly   704 GNSSNGSSNGNNNSSTGNGTSGGGGGNNAGGGGGGTNSNDGLHRNGGNGNSSCHEAGIGSLQN-- 766

  Fly   590 YDISAD---YVDSTTYEPRST---IIDP--------EFISHADGDINDVLIKTLAEAHANTNTKL 640
               :||   ..||.|: |.||   :|:|        ||:...|              .....|:|
  Fly   767 ---TADSKLCFDSGTH-PSSTADALIEPLRVSPMIREFVQSID--------------DREWQTQL 813

  Fly   641 EAVHDMFRKQPDVSRILYYKNLGQEELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLK 705
            .|   :.:||.       |..:..:...|.| :.|.|.:.:.:::|:....|..|..|||:.||:
  Fly   814 FA---LLQKQT-------YNQVEVDLFELMC-KVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQ 867

  Fly   706 TGSFELAIV-----RM-SRLLDLSQ-------NAVLYGDVMLPQEAFYTSDSEEMRLVSRIFQTA 757
            ....::.::     |: :.|.|.:|       |.:..|.:.:||...|.::.:
  Fly   868 HSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQ------------ 920

  Fly   758 KSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQELETNHAPLKGDVTVLD 822
            ..:.:||....:....:.|:||.|...|:             :|  |:.:...|..::  ..:||
  Fly   921 NKLQDLKFDMGDYVCMKFLILLNPSVRGI-------------VN--RKTVSEGHDNVQ--AALLD 968

  Fly   823 TLLNNIPNFRD 833
            ..|...|:..|
  Fly   969 YTLTCYPSVND 979

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr3	NP_001334718.1	None
ftz-f1	NP_524143.2	NR_DBD_Lrh-1_like	508..600	CDD:143541	44/91 (48%)
		NR_LBD_Ftz-F1_like	794..1024	CDD:132742	45/240 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910