DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hr3 and Eip75B

DIOPT Version :9

Sequence 1:NP_001334718.1 Gene:Hr3 / 36073 FlyBaseID:FBgn0000448 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster


Alignment Length:973 Identity:235/973 - (24%)
Similarity:367/973 - (37%) Gaps:305/973 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRPRDLLLIQQAKPAGGSKSSSGG------------------PTYIGTDAATAAAVANLRSKVPS 48
            :|.:|   |::...:..|.|:|..                  ||.:.|...|...:...|.:.  
  Fly    48 ERQQD---IEREPSSSNSNSNSNSLTPQRYTHVQVQTVPPRQPTGLTTPGGTQKVILTPRVEY-- 107

  Fly    49 ISIIPLPVSTTIVARSGSG-------ASGTGGSGGAPPALPQLIQSSRSVSTKSTGTSPPLAFIT 106
                   |.....:.:|.|       ..||..|..|||....|:       |.::||  |...||
  Fly   108 -------VQQRATSSTGGGMKHVYSQQQGTAASRSAPPETTALL-------TTTSGT--PQIIIT 156

  Fly   107 EGSGTSGAPALTLLPR-----PQQQHQYQQTDKCTVLKLDVLKQQSGVAANSSSNTYLQIEQQLS 166
            .     ..|:...|.|     |...|.|||...        .:|||....:.......|..:.:.
  Fly   157 R-----TLPSNQHLSRRHSASPSALHHYQQQQP--------QRQQSPPPLHHQQQQQQQHVRVIR 208

  Fly   167 ELEAADEEEENMASLLGSAPPAQILANQPIIVKIEPTQSFHIVDEGDTRVLSLPLSDADKLGASW 231
            :....||....:|:...|..|              |....|      :|  |.|:|..       
  Fly   209 DGRLYDEATVVVAARRHSVSP--------------PPLHHH------SR--SAPVSPV------- 244

  Fly   232 IDLKDIAGLQAGGGATLLDVCFEQANEDGTIIATVQPDLENELEAELKAEGEPEDETEPEPPAPK 296
                 ||  :.||.|..:|..::|..         .|.|         |...|.....|.||.|:
  Fly   245 -----IA--RRGGAAAYMDQQYQQRQ---------TPPL---------APPPPPPPPPPPPPPPQ 284

  Fly   297 R-----LATTRP----------------------------------AQSRPQQQQQQQQQQVKFL 322
            :     ::|..|                                  ||...||.||.||.|...:
  Fly   285 QQQQQYISTGVPPPTAAARKFVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQHVI 349

  Fly   323 SDPPALARSSSFSSLSSFSS--------ISNISSVCKNMASNTSQEGSLKRTKERTPPPMPPLTT 379
            :...:.:.||:..|..|.||        .|:.||...:......|:.||..:..|.|||.||   
  Fly   350 ASVSSSSSSSAIGSGGSSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPP--- 411

  Fly   380 HKPAATTTATSATSAAAATSAATASATATSARENSREHSSSSSGSN-GAMTAQIEI----IPCKV 439
                            .....|::|::..|:..|:...||||:|.. .:....:|.    :.|:|
  Fly   412 ----------------PKVKHASSSSSGNSSSSNTNNSSSSSNGEEPSSSIPDLEFDGTTVLCRV 460

  Fly   440 CGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQ-CPRNKQCVVDRVNRNRCQYCRLQKCLKLGMS 503
            ||||:||.||||.:|||||||||||....:.|: |.:|:||.:.|:||||||||||:||:.:|||
  Fly   461 CGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMS 525

  Fly   504 RDAVKFGRMSKKQREKV---EDEVRFHRAQMRAQSDAAPDSSVYDTQTPSSSDQLHHNNYNSGGY 565
            ||||:|||:.|:::.::   ..:...:|.|.||.:....|                         
  Fly   526 RDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDD------------------------- 565

  Fly   566 SNNEVGYGSPYGYSASVTPQQTMQYDISADYVDSTTYEPRSTIIDPEFISHADGDINDVLIKTLA 630
                                                 :||                   |:..:.
  Fly   566 -------------------------------------QPR-------------------LLAAVL 574

  Fly   631 EAHAN----TNTKLEAVHDMFRKQPDVSR-------ILYYKNLGQEELWLDCAEKLTQMIQNIIE 684
            .||..    |..|:.|:....|..|..|.       :.....|..|:   :.:::...:|:.:|:
  Fly   575 RAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQSEQ---EFSQRFAHVIRGVID 636

  Fly   685 FAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAV--LYGDVMLPQEAFYTSDSEEM 747
            ||.:||||..|:|||:..|||.|.|:...||:..:.|.|.|::  |.|.|| .::|.....:...
  Fly   637 FAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVM-RRDAIQNGANARF 700

  Fly   748 RLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQELETNHA 812
             ||...|..|:.:..:.||:.|:.|:.::||:.|:|.|:|....|::::: .:....|.:...:.
  Fly   701 -LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYS-RLKGCLQYIVAQNR 763

  Fly   813 PLKGDVTVLDTLLNNIPNFRDISILHMESLSKFKLQHPNVVFPALYKELFSI------DSQQD 869
            |.:.:  .|..||..:|:.|.:|.||.|.|..|:.:|..:    |.::::|:      |.||:
  Fly   764 PDQPE--FLAKLLETMPDLRTLSTLHTEKLVVFRTEHKEL----LRQQMWSMEDGNNSDGQQN 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr3NP_001334718.1 None
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 52/87 (60%)
NR_LBD_REV_ERB 609..796 CDD:132738 57/194 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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