Protein Alignment Hr3 and Hr39

DIOPT Version :9

• Sequence 1: NP_001334718.1
• Gene: Hr3 / 36073
• FlyBaseID: FBgn0000448
• Length: 871
• Species: Drosophila melanogaster
• Sequence 2: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Alignment Length: 970
• Identity: 207/970 - (21%)
• Similarity: 328/970 - (33%)
• Gaps: 330/970 - (34%)

  Fly    11 QQAKPAGGSKSSSGGPTYIGTDAATAAAVANLRSKVPSISIIPLPVSTTIVARS----GSGASGT 71
            ||:.|.|||....                            :|:.:.||.||.:    ||.|.|.
  Fly    11 QQSGPLGGSSGYQ----------------------------VPVNMCTTTVANTTTTLGSSAGGA 47

  Fly    72 GGS--------------------GGAPPALPQLIQSSRSVSTKSTGTSPPLAFITEGSGTSGAPA 116
            .||                    |...|.:...:..|..:         ||      ||.|
  Fly    48 TGSRHNVSVTNIKCELDELPSPNGNMVPVIANYVHGSLRI---------PL------SGHS---- 93

  Fly   117 LTLLPRPQQQHQYQQTDKCTVLKLDVLKQQSGVAANSSSNTYLQIEQQLSELEA-ADEEEENMAS 180
                     .|:...::: .:..::.||.:...||:.:....:..|.:||:.|. ..||...|..
  Fly    94 ---------NHRESDSEE-ELASIENLKVRRRTAADKNGPRPMSWEGELSDTEVNGGEELMEMEP 148

  Fly   181 LLGS------APPAQILANQPIIVKIEPTQSFHIVDEGDTRVLSLPLSDADKLGASWIDLKDIAG 239
            .:.|      |||..:.|.|||..::|                                  :|||
  Fly   149 TIKSEVVPAVAPPQPVCALQPIKTELE----------------------------------NIAG 179

  Fly   240 -LQAGGGATLLDVCFEQANEDGTI-----IATVQPDLENELEAELKAEGEPEDETE--------- 289
             :|      :.:.|:.|:|.....     :|..|.|..|     ||.|....|.:.
  Fly   180 EMQ------IQEKCYPQSNTQHHAATKLKVAPTQSDPIN-----LKFEPPLGDNSPLLAARSKSS 233

  Fly   290 -------PEPPAPKRLATTRPAQSRPQQQQQQQQQQVKFLSDP--PALARSSSFSSLSSFSSISN 345
                   |..|:|.....:....|.|.|.....:..      |  |:|:|::|.:|.||..|.|:
  Fly   234 SGGHLPLPTNPSPDSAIHSVYTHSSPSQSPLTSRHA------PYTPSLSRNNSDASHSSCYSYSS 292

  Fly   346 ISSVCKNMASNTSQEGSLKRTKERTPPPMPPLTTHKPAATTTATSATSAAAATSAATASATATSA 410
                                  |.:|...|....|.|.|.|...: ...........||:|..|:
  Fly   293 ----------------------EFSPTHSPIQARHAPPAGTLYGN-HHGIYRQMKVEASSTVPSS 334

  Fly   411 RENSREHSSSSSGSN---------------GAMTAQIEIIPCKVCGDKSSGVHYGVITCEGCKGF 460
            .:.::..|..|:.||               |....|:...||.:||||.||.|||:.:||.||||
  Fly   335 GQEAQNLSMDSASSNLDTVGLGSSHPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGF 399

  Fly   461 FRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVR 525
            |:|:..:..||.|.|...|.|....|.:|..||.:|||:.||..:|::            ||..|
  Fly   400 FKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIR------------EDRTR 452

  Fly   526 FHRAQMRAQSDAAPDSSVYDTQTP------------SSSDQLHHNNYNSGGYSNNEVGYGSPYGY 578
            ..|:..:. |...|:|.:....:|            :|..|.|...:...|:.      |.|...
  Fly   453 GGRSTYQC-SYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFG------GVPIPC 510

  Fly   579 SASVTPQQTMQ-YDISADYVDSTTYEPRST---------IIDPEFI-SHADGD---INDVLIK-- 627
            |.|:....::. ..:.::.:..|..:...|         |:|.|.: .:.|.:   ||..|..
  Fly   511 STSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLWQYTDAELARINQPLSAFA 575

  Fly   628 -----------TLAEAHANTNTKLEAVHDMF----RKQPDVSRILYYKNLGQEELWLDCAEKLTQ 677
                       |.:.|||.....|.|...:.    ...||:  |.:..|:....|:
  Fly   576 SGSSSSSSSSGTSSGAHAQLTNPLLASAGLSSNGENANPDL--IAHLCNVADHRLY--------- 629

  Fly   678 MIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAVLYGDVMLPQEAFYTS 742
               .|:::.|.:|.|..:|.||||.||.....||.
  Fly   630 ---KIVKWCKSLPLFKNISIDDQICLLINSWCELL------------------------------ 661

  Fly   743 DSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQEL 807
                  |.|..|::..:..|:|:::.     :.:.|...:.||::  |.|:|:.||:.:..|..:
  Fly   662 ------LFSCCFRSIDTPGEIKMSQG-----RKITLSQAKSNGLQ--TCIERMLNLTDHLRRLRV 713

  Fly   808 ET-NHAPLKGDVTVL----DTLLNNIPNFRDISILHMESLSKFKLQH-PNVVFPALYKEL 861
            :. .:..:|  |.||    .|.|......|:.....::||..:.|.| |:.  |:.:.||
  Fly   714 DRYEYVAMK--VIVLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDT--PSKFGEL 769

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr3	NP_001334718.1	None
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	40/104 (38%)
		NR_LBD_F2	617..779	CDD:132728	45/212 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910