Protein Alignment Hr3 and rorc

DIOPT Version :9

• Sequence 1: NP_001334718.1
• Gene: Hr3 / 36073
• FlyBaseID: FBgn0000448
• Length: 871
• Species: Drosophila melanogaster
• Sequence 2: XP_031747715.1
• Gene: rorc / 100489391
• XenbaseID: XB-GENE-481075
• Length: 422
• Species: Xenopus tropicalis
• Alignment Length: 418
• Identity: 117/418 - (27%)
• Similarity: 184/418 - (44%)
• Gaps: 82/418 - (19%)

  Fly   506 AVKFGRMSKKQREKVEDEVRFHRAQMRAQSDAAPDSSVYDTQT--PSSSDQLHHNNYNSGGYSNN 568
            ||||||||||||:.::.|||....|....:..|..:..:..:|  ||||:      ..|...|.:
 Frog    29 AVKFGRMSKKQRDLLQQEVRRMEEQRMLPTSIACSAGSHGDKTALPSSSE------LPSPFVSAS 87

  Fly   569 EVGYGSPYGYSASVTP-----------------QQTMQYDISADYVDSTTYEPRS---------- 606
            ..|:|. :..|.||.|                 .||......:.:.|...|...|
 Frog    88 WTGHGK-WDTSCSVRPCPVPRTHPPIQSHHPEKIQTEAVSRKSCFRDHQPYLEHSRLNIFQRLPP 151

  Fly   607 TIIDPE---------------FISHADGDINDVLIKTLAEAHANTNTKL--EAVHDMFRKQPDVS 654
            |:..||               .||..:   .|:|::.:..|:..| .||  |::..|..:....:
 Frog   152 TLQSPECYGSPNFSSCLLSERLISAVE---LDLLMQNVVGAYRET-CKLHQESLQAMRWETFTPA 212

  Fly   655 RILYYKNLGQEELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRL 719
            .|..::....:::|..|...:|..||.|:||||.:.|||.|:.:|||:|||.|:.||.::||||.
 Frog   213 EIQSFQQKTMDQMWERCVCHITDAIQYIVEFAKRLSGFMELNPNDQIVLLKAGAMELLLIRMSRA 277

  Fly   720 LDLSQNAVLYGDVMLPQEAFYTSDSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERN 784
            .:...:.:.:.....|.:.|.:....:  |:|.:|....|:..|.|:|.|:|.:.|:|||.|.:.
 Frog   278 FNCYNSTIYFEGKYAPLDLFQSLGCND--LISAMFDLCHSLCALNLSEHEMAFFSSMVLLDPSQP 340

  Fly   785 GVRGNTEIQRL-------FNLSMNAIRQELETNHAPLKGDVTVLDTLLNNIPNFRDISILHMESL 842
            .::...:::.|       |...:...|:|......|.:|      .||.       |..||||.|
 Frog   341 WLQEKEKVESLHMKLDLSFRQLLRRTRRESIICKLPQRG------RLLG-------ICQLHMEKL 392

  Fly   843 SKFKLQHPNVV---FPALYKELFSIDSQ 867
            :.|:..:|.:.   ||.||||||..|::
 Frog   393 NIFRQMYPGIAWERFPPLYKELFVSDTE 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr3	NP_001334718.1	None
rorc	XP_031747715.1	NR_LBD_ROR_like	177..415	CDD:132737	74/256 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45805
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010