Protein Alignment Hr3 and rorb

DIOPT Version :9

• Sequence 1: NP_001334718.1
• Gene: Hr3 / 36073
• FlyBaseID: FBgn0000448
• Length: 871
• Species: Drosophila melanogaster
• Sequence 2: XP_002940077.1
• Gene: rorb / 100487062
• XenbaseID: XB-GENE-484846
• Length: 458
• Species: Xenopus tropicalis
• Alignment Length: 465
• Identity: 188/465 - (40%)
• Similarity: 261/465 - (56%)
• Gaps: 38/465 - (8%)

  Fly   428 MTAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYC 492
            |.||||:||||:|||||||:||||||||||||||||||.:..:|.|||.:.|::||.||||||:|
 Frog     1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHC 65

  Fly   493 RLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRAQ-----SDAAPDSSVYDTQTPSSS 552
            ||||||.||||||||||||||||||:.:..||:.|:.:::.|     .:|...:.||.:...:..
 Frog    66 RLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSNISNGL 130

  Fly   553 DQLHHNNYNSGGYSNNEVGYGSPYGY----SASVTPQQ-----TMQYDISADYVDSTTYEPRSTI 608
            ..|  ||...|.|:|..|.......|    ||..:|.|     |....|..:.:...|..|...:
 Frog   131 SNL--NNDTGGTYANGHVIDLPKSEYYSVDSAQPSPDQSGIDMTGMKQIKQEPIYDLTSVPNLFM 193

  Fly   609 IDPEFISHADGDIN--------DVLIKTLAEAHANT-NTKLEAVHDMFRKQPDVSRILYYKNLGQ 664
                :.|..:|.::        |.:.:.:.::|..| ...::.:|.:..:......|..|:|..:
 Frog   194 ----YSSFNNGQMSPGISMSEIDRVAQNIIKSHLETCQYTVDELHQLAWQTHTYEEIKIYQNKSR 254

  Fly   665 EELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAVLY 729
            |.||..||.::|..||.::||||.|.|||.|.|:|||||||:|..|:.||||.|..:...|.||:
 Frog   255 EALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVIVRMCRAFNPLNNTVLF 319

  Fly   730 GDVMLPQEAFYTSDSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQR 794
            .......:.|.:..|::  .|:..|..|||:..|:|||.|:||:.:.||:.|||..:....::|:
 Frog   320 EGKYGGMQMFKSLGSDD--FVNEAFDFAKSLCSLQLTEEEIALFSAAVLISPERPWLIEPRKVQK 382

  Fly   795 LFNLSMNAIRQELETNHAPLKGDVTVLDTLLNNIPNFRDISILHMESLSKFKLQHP---NVVFPA 856
            |......|::..::.||.    |...|..|:..|||...:..||.|.|..||..||   |.:||.
 Frog   383 LQERIYFALQHVIQKNHL----DDETLAKLIAKIPNITALCNLHGEKLQVFKQTHPEIVNTLFPP 443

  Fly   857 LYKELFSIDS 866
            ||||||:.||
 Frog   444 LYKELFNPDS 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr3	NP_001334718.1	None
rorb	XP_002940077.1	NR_DBD_ROR	3..97	CDD:143526	71/93 (76%)
		NR_LBD_ROR_like	209..449	CDD:132737	87/245 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H38250
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000