DRSC/TRiP Functional Genomics Resources

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Protein Alignment mlt and Tbcel

DIOPT Version :9

Sequence 1:NP_001260853.1 Gene:mlt / 36072 FlyBaseID:FBgn0265512 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001344585.2 Gene:Tbcel / 272589 MGIID:1925543 Length:424 Species:Mus musculus


Alignment Length:411 Identity:165/411 - (40%)
Similarity:242/411 - (58%) Gaps:30/411 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PRLSPL---TSVPALLVLNDCDIDSAGDFDSIREKCQRVRELDLAQNKLSDWSEVFSILEHMPRI 113
            |:.||:   .::|::||||.|.|..|||...|...|..|.||||:.|||.||.||..|:.::|::
Mouse    38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQL 102

  Fly   114 EFLNLSKNQLASPIGTLPTAPTIN-LKSLVLNGTYLDWACVDTLLKNLPVLQELHLSLNNYRQVL 177
            ||||||.|.|:..:.....|.:.: ::.||||.:...|..|.|:|:.||.|:||.|.||:|..|.
Mouse   103 EFLNLSSNPLSLSVLERTCAGSFSGVRKLVLNNSKASWETVHTILQELPELEELFLCLNDYETVS 167

  Fly   178 IDAEEAEQRLQETETPEETERRITKAHPALKTLHFTGNPVEHWQEICRLGRLFPNLEALVLADCP 242
            ..:                    ...| :||.||.|.|.::.|.||.:||.:||:|:.||||:..
Mouse   168 CPS--------------------VCCH-SLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNH 211

  Fly   243 IKSLQAEESSETHRYFPSLRLLNLSSAQLDSWAAIDELAKFSELRNLRVKHWPLWESLECTEHER 307
            :.::: |.:....|.||:||.::|..:.|.||..||:|..|.:|..:|:...||.:..  |..||
Mouse   212 LNAIE-EPADSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPY--TTEER 273

  Fly   308 RQLLIARLPNVEMLNGGGKISSDERVDSERAFVRYYMDKPEEERPARYQELLQIHGKLDPLVNVS 372
            |:|::||||:|..|| |..::..||.||||.|:|||:|.|:||.|.||.||:..:|||:||..|.
Mouse   274 RKLVVARLPSVSKLN-GSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVD 337

  Fly   373 LKPDKRVKVLFTYNDVSESRFVDIYLTVNDLKVKLEKLVGLAPNKMRLYYLDQDYKEFGPEEMRY 437
            |:|....||...:||..|...:.:..||.:||.:|:.||.|..:.|.|||.|.: ..||||||:|
Mouse   338 LRPQSSAKVEVHFNDQVEEMSIRLDQTVAELKKQLKTLVQLPTSSMLLYYFDHE-APFGPEEMKY 401

  Fly   438 PNKQLYSYNIQSGDEIIIDAK 458
            .::.|:|:.|:.||:|.:::|
Mouse   402 SSRALHSFGIRDGDKIFVESK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mltNP_001260853.1 LRR <46..>177 CDD:227223 55/128 (43%)
LRR_RI 57..>276 CDD:238064 82/222 (37%)
leucine-rich repeat 87..112 CDD:275380 13/24 (54%)
leucine-rich repeat 113..137 CDD:275380 9/23 (39%)
leucine-rich repeat 138..162 CDD:275380 9/23 (39%)
leucine-rich repeat 207..232 CDD:275380 12/24 (50%)
leucine-rich repeat 233..260 CDD:275380 8/26 (31%)
leucine-rich repeat 261..285 CDD:275380 10/23 (43%)
UBQ 379..456 CDD:294102 31/76 (41%)
TbcelNP_001344585.2 PPP1R42 <50..113 CDD:411060 33/62 (53%)
leucine-rich repeat 52..74 CDD:275380 10/21 (48%)
LRR 1 73..98 14/24 (58%)
leucine-rich repeat 78..101 CDD:275378 12/22 (55%)
LRR 2 99..123 9/23 (39%)
leucine-rich repeat 102..175 CDD:275378 28/93 (30%)
LRR 3 124..147 7/22 (32%)
leucine-rich repeat 129..148 CDD:275380 7/18 (39%)
LRR 4 152..173 8/40 (20%)
LRR 5 175..196 9/20 (45%)
leucine-rich repeat 176..201 CDD:275378 12/24 (50%)
LRR_9 <191..304 CDD:405295 48/116 (41%)
LRR 6 201..222 6/21 (29%)
leucine-rich repeat 202..228 CDD:275378 8/26 (31%)
LRR 7 228..249 8/20 (40%)
Ubl_TBCEL 337..422 CDD:340565 33/85 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849997
Domainoid 1 1.000 54 1.000 Domainoid score I11271
eggNOG 1 0.900 - - E1_KOG2982
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16120
Inparanoid 1 1.050 278 1.000 Inparanoid score I2904
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49290
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006363
OrthoInspector 1 1.000 - - oto93585
orthoMCL 1 0.900 - - OOG6_107210
Panther 1 1.100 - - LDO PTHR15140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2217
SonicParanoid 1 1.000 - - X4632
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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