DRSC/TRiP Functional Genomics Resources

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Protein Alignment mlt and coel-1

DIOPT Version :9

Sequence 1:NP_001260853.1 Gene:mlt / 36072 FlyBaseID:FBgn0265512 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_741764.1 Gene:coel-1 / 180700 WormBaseID:WBGene00016866 Length:432 Species:Caenorhabditis elegans


Alignment Length:474 Identity:138/474 - (29%)
Similarity:237/474 - (50%) Gaps:84/474 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLLEALERKYFAECEFENAHQPELHKRSDLPNDFTVTKCGGRMEFSIFIPRLSP--LTSVPA--L 63
            :|:.:||:||..:.|             |:..|...|...|          .||  :.|..|  |
 Worm     7 TLVRSLEQKYLDDDE-------------DIVQDIIFTGFTG----------CSPCKMASQRALEL 48

  Fly    64 LVLNDCDIDSAGDFDSIREKCQRVRELDLAQNKLSDWSEVFSILEHMPRIEFLNLSKNQL----- 123
            ||||:.:||:.||.:.:......|.|.||..|::|.||::..||:::|.:..||:..|.|     
 Worm    49 LVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHLRVLNIGHNPLNPVID 113

  Fly   124 -ASPIGTLPTAPTINLKSLVLNGTYLDWACVDTLLKNLPVLQELHLSLNNYRQVLIDAEEAEQRL 187
             ..|:.||.|        ::||||:|.:..:.:.|..||.:.|||:|.|.:.    |.::.::.:
 Worm   114 HELPVSTLHT--------IILNGTHLPFKTLQSFLSVLPKVTELHMSDNQFN----DDDDCDEPI 166

  Fly   188 QETETPEETERRITKAHPALKTLHFTGNPVEHWQEICRLGRLFPNLEALVLADCPIKSLQAEESS 252
            ..|                ::|:|........|..:..:.:.|||:.::.:.:.|:|.:      
 Worm   167 STT----------------VRTVHLNRCGFLKWSSVMNVVKRFPNVCSVFVCENPLKDV------ 209

  Fly   253 ETH-RYF---PSLRLLNLSSAQLDSWAAIDELAKFSELRNLRVKHWPLWESLECTEHERRQLLIA 313
             || ::|   |....|||:...:|||.::|:|.:.:.:.:|||.:.||.::|  |..||..|:|.
 Worm   210 -THCKHFEQLPFWNFLNLAKTSIDSWDSLDQLNRMTSISDLRVPNIPLLDAL--TNEERLHLIIG 271

  Fly   314 RLPNVEMLNGGGKISSDERVDSERAFVRYYMDKPEEERPARYQELLQIHGKLDPLVNVSLKPDKR 378
            ||.::.:|| |.||||::|..|||.|:|||.:  ::|:|.:|:.|:..||.|:.||.:.|.|.|.
 Worm   272 RLHHLRVLN-GSKISSEQREQSERFFIRYYQE--QKEKPLQYKTLIDKHGNLEKLVTIDLTPKKE 333

  Fly   379 --VKVLFTYNDVSESRFVDIYLTVNDLKVKLEKLVGLAPNKMRLYYLDQDYK--EFGPEEMRYPN 439
              ||:|....:|::...:.:..||.|....|:..||:...:|:|:.|.:|.:  :|...:...| 
 Worm   334 AVVKILCEEKEVNQEITISLEPTVLDFMKILDPKVGVKFTRMKLFLLREDGRTDDFSSSDYNMP- 397

  Fly   440 KQLYSYNIQSGDEIIIDAK 458
              |:.:.|:.||..::..|
 Worm   398 --LHYFKIEDGDSFLVQEK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mltNP_001260853.1 LRR <46..>177 CDD:227223 45/140 (32%)
LRR_RI 57..>276 CDD:238064 63/230 (27%)
leucine-rich repeat 87..112 CDD:275380 10/24 (42%)
leucine-rich repeat 113..137 CDD:275380 8/29 (28%)
leucine-rich repeat 138..162 CDD:275380 7/23 (30%)
leucine-rich repeat 207..232 CDD:275380 4/24 (17%)
leucine-rich repeat 233..260 CDD:275380 5/30 (17%)
leucine-rich repeat 261..285 CDD:275380 8/23 (35%)
UBQ 379..456 CDD:294102 20/78 (26%)
coel-1NP_741764.1 leucine-rich repeat 46..64 CDD:275378 9/17 (53%)
leucine-rich repeat 65..97 CDD:275378 10/31 (32%)
leucine-rich repeat 98..117 CDD:275378 4/18 (22%)
leucine-rich repeat 121..145 CDD:275378 9/31 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167171
Domainoid 1 1.000 167 1.000 Domainoid score I2331
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16120
Inparanoid 1 1.050 191 1.000 Inparanoid score I2560
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49290
OrthoDB 1 1.010 - - D1495296at2759
OrthoFinder 1 1.000 - - FOG0006363
OrthoInspector 1 1.000 - - oto19203
orthoMCL 1 0.900 - - OOG6_107210
Panther 1 1.100 - - LDO PTHR15140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2217
SonicParanoid 1 1.000 - - X4632
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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