DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNQ and Kcnb2

DIOPT Version :9

Sequence 1:NP_788300.3 Gene:KCNQ / 36071 FlyBaseID:FBgn0033494 Length:993 Species:Drosophila melanogaster
Sequence 2:NP_001091998.1 Gene:Kcnb2 / 98741 MGIID:99632 Length:907 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQNP_788300.3 Ion_trans 100..305 CDD:278921
Ion_trans_2 221..295 CDD:285168
KCNQ_channel <619..719 CDD:281513
Kcnb2NP_001091998.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB 37..143 CDD:197585
BTB_2 37..136 CDD:280393
Ion_trans 230..428 CDD:278921
Ion_trans_2 341..422 CDD:285168
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386
Kv2channel 471..755 CDD:281514
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 761..859
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..907
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.