DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNQ and KCNB2

DIOPT Version :9

Sequence 1:NP_788300.3 Gene:KCNQ / 36071 FlyBaseID:FBgn0033494 Length:993 Species:Drosophila melanogaster
Sequence 2:NP_004761.2 Gene:KCNB2 / 9312 HGNCID:6232 Length:911 Species:Homo sapiens


Alignment Length:703 Identity:156/703 - (22%)
Similarity:256/703 - (36%) Gaps:217/703 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QSRLYNFLERPRGLHA--IFYHVMVFLMVFTCLALSVFSTIKEYEEDAVY-------ILFRMEIL 113
            :.:|::.||:|....|  |...|.:..:|.:.:|||: :|:.|.:|...:       .|..:|.:
Human   176 RKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSL-NTLPELQETDEFGQLNDNRQLAHVEAV 239

  Fly   114 VVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTILASIVVLGMGTSG-------- 170
            .:.|||||:..|..||.         .:.||.|.|..:||::.||...|.:.:..|.        
Human   240 CIAWFTMEYLLRFLSSP---------NKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295

  Fly   171 -----QVFATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMYIGFLGLIFASFL 230
                 |:|        |..:|||::::.|.....:.||..:.....||...:....:|::..|.|
Human   296 VRRVVQIF--------RIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSL 352

  Fly   231 VYMWEKDVN-DKFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIASCCALLGISFFALPAGILG 294
            |:..|||.: .||::...:.||..||:.||||||:.|.|..||::...|.:.|:...|||..|:.
Human   353 VFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIV 417

  Fly   295 SGFALKVQQQQRQKHMIRRRQP-----------AATLIQAVWRCY------------------AA 330
            :.|:...::|:||:..|:||:.           :..|..|..|..                  :|
Human   418 NNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANTKDSA 482

  Fly   331 DEHSVSVATWNIHRVALPSPPASRASSSFKHNTSFVARLPTIRRHKSQTIQTPGGGDGGGVSKPP 395
            |::.:|.:.|...|.||     |..||    |.||        .:|.|.:...            
Human   483 DDNHLSPSRWKWARKAL-----SETSS----NKSF--------ENKYQEVSQK------------ 518

  Fly   396 GSSRASTRYTRTIRDINASVENLEVVQN----------------GKSMNPSFSED---------- 434
             .|......|.:....:.|.:.||::.|                .|...||..|:          
Human   519 -DSHEQLNNTSSSSPQHLSAQKLEMLYNEITKTQPHSHPNPDCQEKPERPSAYEEEIEMEEVVCP 582

  Fly   435 ----SVAETTCLKNIKNSDASQPATLANCKLS-----------SSAGSL-AQFPDRNRDRDQDRR 483
                :||:|..:.::|::.:....|  :|...           .||..| .:||......::.:|
Human   583 QEQLAVAQTEVIVDMKSTSSIDSFT--SCATDFTETERSPLPPPSASHLQMKFPTDLPGTEEHQR 645

  Fly   484 GHGEGEGDQAEEQAKAGGSRRNLTI---PVVLYGFLHGNFLGSTLSLRNPRVA------------ 533
            ..|......:.|:   |.:.|:.|:   ||.:...|..:  ||...|.:|..:            
Human   646 ARGPPFLTLSREK---GPAARDGTLEYAPVDITVNLDAS--GSQCGLHSPLQSDNATDSPKSSLK 705

  Fly   534 ---PANDRDLEAGRDEDEVHKDTCQRSNTLPLPV--------------------------KP--- 566
               |...|.|:....|:.........|...||||                          :|   
Human   706 GSNPLKSRSLKVNFKENRGSAPQTPPSTARPLPVTTADFSLTTPQHISTILLEETPSQGDRPLLG 770

  Fly   567 ---DSPSGSPGSGRTGRF-----FAAASH----FLETGFSSPNPIIDVANEED 607
               .:|...|..|.:.||     |..:|.    |.|         ||..::||
Human   771 TEVSAPCQGPSKGLSPRFPKQKLFPFSSRERRSFTE---------IDTGDDED 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQNP_788300.3 Ion_trans 100..305 CDD:278921 62/225 (28%)
Ion_trans_2 221..295 CDD:285168 29/74 (39%)
KCNQ_channel <619..719 CDD:281513
KCNB2NP_004761.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB 37..143 CDD:197585
BTB_2 37..136 CDD:280393
Ion_trans 230..428 CDD:278921 61/214 (29%)
Ion_trans_2 341..422 CDD:285168 30/80 (38%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386 4/4 (100%)
Kv2channel 471..759 CDD:281514 58/324 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534 9/55 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..571 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..665 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..739 9/53 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 760..865 14/64 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 892..911
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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