DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNQ and KCNB2

DIOPT Version :10

Sequence 1:NP_788300.3 Gene:KCNQ / 36071 FlyBaseID:FBgn0033494 Length:993 Species:Drosophila melanogaster
Sequence 2:NP_004761.2 Gene:KCNB2 / 9312 HGNCID:6232 Length:911 Species:Homo sapiens


Alignment Length:703 Identity:156/703 - (22%)
Similarity:256/703 - (36%) Gaps:217/703 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QSRLYNFLERPRGLHA--IFYHVMVFLMVFTCLALSVFSTIKEYEEDAVY-------ILFRMEIL 113
            :.:|::.||:|....|  |...|.:..:|.:.:|||: :|:.|.:|...:       .|..:|.:
Human   176 RKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSL-NTLPELQETDEFGQLNDNRQLAHVEAV 239

  Fly   114 VVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTILASIVVLGMGTSG-------- 170
            .:.|||||:..|..||.         .:.||.|.|..:||::.||...|.:.:..|.        
Human   240 CIAWFTMEYLLRFLSSP---------NKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295

  Fly   171 -----QVFATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMYIGFLGLIFASFL 230
                 |:|        |..:|||::::.|.....:.||..:.....||...:....:|::..|.|
Human   296 VRRVVQIF--------RIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSL 352

  Fly   231 VYMWEKDVN-DKFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIASCCALLGISFFALPAGILG 294
            |:..|||.: .||::...:.||..||:.||||||:.|.|..||::...|.:.|:...|||..|:.
Human   353 VFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIV 417

  Fly   295 SGFALKVQQQQRQKHMIRRRQP-----------AATLIQAVWRCY------------------AA 330
            :.|:...::|:||:..|:||:.           :..|..|..|..                  :|
Human   418 NNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANTKDSA 482

  Fly   331 DEHSVSVATWNIHRVALPSPPASRASSSFKHNTSFVARLPTIRRHKSQTIQTPGGGDGGGVSKPP 395
            |::.:|.:.|...|.||     |..||    |.||        .:|.|.:...            
Human   483 DDNHLSPSRWKWARKAL-----SETSS----NKSF--------ENKYQEVSQK------------ 518

  Fly   396 GSSRASTRYTRTIRDINASVENLEVVQN----------------GKSMNPSFSED---------- 434
             .|......|.:....:.|.:.||::.|                .|...||..|:          
Human   519 -DSHEQLNNTSSSSPQHLSAQKLEMLYNEITKTQPHSHPNPDCQEKPERPSAYEEEIEMEEVVCP 582

  Fly   435 ----SVAETTCLKNIKNSDASQPATLANCKLS-----------SSAGSL-AQFPDRNRDRDQDRR 483
                :||:|..:.::|::.:....|  :|...           .||..| .:||......::.:|
Human   583 QEQLAVAQTEVIVDMKSTSSIDSFT--SCATDFTETERSPLPPPSASHLQMKFPTDLPGTEEHQR 645

  Fly   484 GHGEGEGDQAEEQAKAGGSRRNLTI---PVVLYGFLHGNFLGSTLSLRNPRVA------------ 533
            ..|......:.|:   |.:.|:.|:   ||.:...|..:  ||...|.:|..:            
Human   646 ARGPPFLTLSREK---GPAARDGTLEYAPVDITVNLDAS--GSQCGLHSPLQSDNATDSPKSSLK 705

  Fly   534 ---PANDRDLEAGRDEDEVHKDTCQRSNTLPLPV--------------------------KP--- 566
               |...|.|:....|:.........|...||||                          :|   
Human   706 GSNPLKSRSLKVNFKENRGSAPQTPPSTARPLPVTTADFSLTTPQHISTILLEETPSQGDRPLLG 770

  Fly   567 ---DSPSGSPGSGRTGRF-----FAAASH----FLETGFSSPNPIIDVANEED 607
               .:|...|..|.:.||     |..:|.    |.|         ||..::||
Human   771 TEVSAPCQGPSKGLSPRFPKQKLFPFSSRERRSFTE---------IDTGDDED 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQNP_788300.3 Ion_trans 72..305 CDD:459842 71/255 (28%)
KCNQ_channel <619..719 CDD:460954
KCNB2NP_004761.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 70/253 (28%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386 4/4 (100%)
Kv2channel 471..759 CDD:397541 58/324 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534 9/55 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..571 3/21 (14%)
FFAT. /evidence=ECO:0000269|PubMed:33124732 605..611 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..665 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..739 9/53 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 760..865 14/64 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 892..911
Blue background indicates that the domain is not in the aligned region.

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