DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNQ and kcna7

DIOPT Version :9

Sequence 1:NP_788300.3 Gene:KCNQ / 36071 FlyBaseID:FBgn0033494 Length:993 Species:Drosophila melanogaster
Sequence 2:XP_701294.4 Gene:kcna7 / 572481 ZFINID:ZDB-GENE-120215-257 Length:233 Species:Danio rerio


Alignment Length:159 Identity:37/159 - (23%)
Similarity:56/159 - (35%) Gaps:57/159 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SLLGKPLNYNRGTRRDVRY-RRLQSRLYNFLERPR-GLHAIFYHVM--------------VFL-- 82
            ||||.|       ||.:|| ..|::.:  ||:|.| ...||.|...              ||:  
Zfish    91 SLLGDP-------RRRLRYFDPLRNEI--FLDRNRFCFDAILYFYQSGGRLRRPANVPLDVFMDE 146

  Fly    83 MVFTCLALSVFSTIKE---YEEDAVYILFRMEILVVIWFTMEF-----GARLWSSGCRSRYQGCL 139
            :.|..|...:.:..||   :.::....|...|....||...|.     |||:             
Zfish   147 LRFYELGEDIMARFKEDEGFPKEEPRPLPESEFQRKIWMLFEHPESSGGARI------------- 198

  Fly   140 GRLKFVKRPFCIIDIVTILASIVVLGMGT 168
                     ..||.::.|:.||::..:.|
Zfish   199 ---------IAIISVMVIVVSILIFCLET 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQNP_788300.3 Ion_trans 100..305 CDD:278921 14/74 (19%)
Ion_trans_2 221..295 CDD:285168
KCNQ_channel <619..719 CDD:281513
kcna7XP_701294.4 BTB_2 71..160 CDD:280393 21/77 (27%)
BTB 71..158 CDD:197585 21/75 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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