Protein Alignment KCNQ and kcns3b

DIOPT Version :10

• Sequence 1: NP_788300.3
• Gene: KCNQ / 36071
• FlyBaseID: FBgn0033494
• Length: 993
• Species: Drosophila melanogaster
• Sequence 2: NP_001032460.1
• Gene: kcns3b / 558674
• ZFINID: ZDB-GENE-051120-78
• Length: 424
• Species: Danio rerio
• Alignment Length: 311
• Identity: 79/311 - (25%)
• Similarity: 147/311 - (47%)
• Gaps: 59/311 - (18%)

  Fly    26 NSERILQPRMSLLGKPLNYNRGTR-RDVRYRRLQSRLYNFLERP------RGLHAIFYHVMVFLM 83
            :|:......:|:..:.|..:.|.| .|||     ..::..||.|      ||:.|    |.|.::
Zfish   136 SSKNASSGEISVTSEDLWKSEGMRCSDVR-----KLMWETLEDPQHSRCSRGVAA----VSVLVI 191

  Fly    84 VFTCLALSVFSTIK-EYEEDAVY-ILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVK 146
            :.:.||:.|.|..: .|:.|..: :|..:|:..:::|::||..|:.::.         ..|:|:.
Zfish   192 LISILAMCVHSLPEFRYQTDGEHSVLDSVELFCIVFFSVEFFLRVIAAP---------QPLRFLG 247

  Fly   147 RPFCIIDIVTILASIVVL-----------------GMGTSGQVFATSALRGLRFFQILRMVR--- 191
            .|..:||:.:||...:.|                 .||...||     ||.:|.|::|::.|
Zfish   248 NPLNMIDVASILPFYITLAVERLDEEDKEENQSLVNMGRVVQV-----LRLMRSFRVLKLARHSE 307

  Fly   192 -MDRRGGTWKLLGSVVYAHRQELITTMYIGFLGLIFASFLVYMWEKDVNDKFSNFAQALWWGVIT 255
             |...|.|  |:..........|..|:.|.|    |::|:.|..:::.:.:.|:.....|||:|:
Zfish   308 GMRAFGET--LMNCQCEVGLLVLFITVGISF----FSTFIYYTEKEEASSQLSSIPICWWWGIIS 366

  Fly   256 LCTVGYGDMVPITWQGKLIASCCALLGISFFALPAGILGSGFALKVQQQQR 306
            :.||||||:.|:|..|:::|:.|.|.|:...:||..|:.:.|:...::.::
Zfish   367 MTTVGYGDVYPLTVAGRIVATVCILCGLLVISLPITIIMNNFSKYFEKNRK 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KCNQ	NP_788300.3	Ion_trans	72..305	CDD:459842	66/255 (26%)
		KCNQ_channel	<619..719	CDD:460954
kcns3b	NP_001032460.1	BTB_POZ	15..117	CDD:453885
		Ion_trans	186..414	CDD:459842	65/247 (26%)