DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNQ and KCNG3

DIOPT Version :10

Sequence 1:NP_788300.3 Gene:KCNQ / 36071 FlyBaseID:FBgn0033494 Length:993 Species:Drosophila melanogaster
Sequence 2:NP_579875.1 Gene:KCNG3 / 170850 HGNCID:18306 Length:436 Species:Homo sapiens


Alignment Length:334 Identity:79/334 - (23%)
Similarity:131/334 - (39%) Gaps:77/334 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DPDNDIYAFY--DIRGYKGK--CRPGRPNSERILQPRMSLLGKPLNYNRGTRRDVRYRRLQSRLY 62
            |..:|.|.||  |..|..|:  .|||...:                        ...||...|:.
Human   118 DRMSDTYTFYSADEPGVLGRDEARPGGAEA------------------------APSRRWLERMR 158

  Fly    63 NFLERPRGLHA--IFYHVMVFLMVFTCLALSVFSTIKEY----------------------EEDA 103
            ...|.|....|  |...|.|..::.:.:.|.. ||:.::                      |...
Human   159 RTFEEPTSSLAAQILASVSVVFVIVSMVVLCA-STLPDWRNAAADNRSLDDRSRYSAGPGREPSG 222

  Fly   104 VYILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTI----LASIVVL 164
            :     :|.:.:.|||.|         |..|:.....:.:|||||..|||::.|    ::.::.:
Human   223 I-----IEAICIGWFTAE---------CIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTV 273

  Fly   165 GMGTSGQV-FATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMYIGFLGLIFAS 228
            ..|.:.|: .|...||.||..:|..::::.|.....:.||..:....:|::..:....:.:...|
Human   274 FTGENSQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFS 338

  Fly   229 FLVYMWEKDV-----NDKFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIASCCALLGISFFAL 288
            .|..:.|..:     |..|::...|.||.:|::.|||||||.|||..|:::...|.:.||...||
Human   339 ALSQLLEHGLDLETSNKDFTSIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLAL 403

  Fly   289 PAGILGSGF 297
            |...:...|
Human   404 PITFIYHSF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQNP_788300.3 Ion_trans 72..305 CDD:459842 63/260 (24%)
KCNQ_channel <619..719 CDD:460954
KCNG3NP_579875.1 BTB_POZ_KCNG3 11..122 CDD:349729 1/3 (33%)
Ion_trans 219..420 CDD:459842 56/208 (27%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 373..378 4/4 (100%)
Blue background indicates that the domain is not in the aligned region.

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