Sequence 1: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005174318.1 | Gene: | kcnc1b / 100334453 | ZFINID: | ZDB-GENE-080414-3 | Length: | 598 | Species: | Danio rerio |
Alignment Length: | 309 | Identity: | 86/309 - (27%) |
---|---|---|---|
Similarity: | 137/309 - (44%) | Gaps: | 51/309 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 RDVRYRRLQSRLYNFLERPRG-------LHAIFYHVMVFLMVFTCLALSVFSTI----KEY---- 99
Fly 100 --------EEDAVYILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVT 156
Fly 157 ILASIVVLGM-GTSGQVF--ATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMY 218
Fly 219 IGFLG-LIFASFLVYMWE--KDVND-------KFSNFAQALWWGVITLCTVGYGDMVPITWQGKL 273
Fly 274 IASCCALLGISFFALPAGILGSGF------ALKVQQQQRQKHMIRRRQP 316 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 70/223 (31%) |
Ion_trans_2 | 221..295 | CDD:285168 | 31/83 (37%) | ||
KCNQ_channel | <619..719 | CDD:281513 | |||
kcnc1b | XP_005174318.1 | BTB | 10..112 | CDD:197585 | |
BTB_2 | 10..104 | CDD:280393 | |||
Ion_trans | 230..446 | CDD:278921 | 68/224 (30%) | ||
Ion_trans_2 | <389..436 | CDD:285168 | 20/46 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |