Sequence 1: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001108379.1 | Gene: | kcnq2a / 100141342 | ZFINID: | ZDB-GENE-080220-37 | Length: | 349 | Species: | Danio rerio |
Alignment Length: | 313 | Identity: | 179/313 - (57%) |
---|---|---|---|
Similarity: | 235/313 - (75%) | Gaps: | 15/313 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 GRPNSER---ILQPRMSLLGKPLNYNRGT---RRDVRYRRLQSRLYNFLERPRGLHAIFYHVMVF 81
Fly 82 LMVFTCLALSVFSTIKEYEEDAVYILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVK 146
Fly 147 RPFCIIDIVTILASIVVLGMGTSGQVFATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQ 211
Fly 212 ELITTMYIGFLGLIFASFLVYMWEKDVN-DKFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIA 275
Fly 276 SCCALLGISFFALPAGILGSGFALKVQQQQRQKHMIRRRQPAATLIQAVWRCY 328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 125/205 (61%) |
Ion_trans_2 | 221..295 | CDD:285168 | 46/74 (62%) | ||
KCNQ_channel | <619..719 | CDD:281513 | |||
kcnq2a | NP_001108379.1 | Ion_trans | 119..325 | CDD:278921 | 125/205 (61%) |
Ion_trans_2 | 240..315 | CDD:285168 | 46/74 (62%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 307 | 1.000 | Domainoid score | I1323 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 502 | 1.000 | Inparanoid score | I1321 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D485399at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm24976 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102886 | |
Panther | 1 | 1.100 | - | - | O | PTHR11537 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X604 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.970 |