Sequence 1: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096411.1 | Gene: | kcnd3 / 100125015 | XenbaseID: | XB-GENE-5867971 | Length: | 653 | Species: | Xenopus tropicalis |
Alignment Length: | 573 | Identity: | 133/573 - (23%) |
---|---|---|---|
Similarity: | 220/573 - (38%) | Gaps: | 182/573 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 AFYDI----------RGYKGKCRPGRPNSERILQPRMSLLGKPLNYNRGTRRDVRYRRLQSRLYN 63
Fly 64 FLERPR--GLHAIFYHVMVFLMVFTCLALSVFSTIKE------------------YEEDAVYILF 108
Fly 109 RMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTILASIVVLGMGTSGQVF 173
Fly 174 ATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMYIGFL-------GLIFASFLV 231
Fly 232 YMWEKDVNDKFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIASCCALLGISFFALPAGILGSG 296
Fly 297 FALKVQQQQR------QK-------------------HMIRR-------------RQP----AAT 319
Fly 320 LIQA----VWRC--------YAADEHSVSVAT---------------WNIHRVALPSPPASRASS 357
Fly 358 -SFKH--NTSFVARLPTIRRHKSQTIQTPGGGDGGGVSKPPGSSRASTRYTRTIRDINASVENLE 419
Fly 420 VVQNGKSMNPSFSEDSVAETTCLKNIKNSDASQPATLANCKLSSSAGSLAQFP 472 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 61/211 (29%) |
Ion_trans_2 | 221..295 | CDD:285168 | 28/80 (35%) | ||
KCNQ_channel | <619..719 | CDD:281513 | |||
kcnd3 | NP_001096411.1 | Shal-type | 3..28 | CDD:288455 | |
BTB | 42..139 | CDD:197585 | 6/19 (32%) | ||
BTB_2 | 42..131 | CDD:280393 | 4/11 (36%) | ||
Ion_trans | 217..412 | CDD:278921 | 61/215 (28%) | ||
Ion_trans_2 | 328..408 | CDD:285168 | 28/79 (35%) | ||
DUF3399 | 442..563 | CDD:288712 | 27/138 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |