Sequence 1: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096396.1 | Gene: | kcnf1 / 100124998 | XenbaseID: | XB-GENE-979363 | Length: | 484 | Species: | Xenopus tropicalis |
Alignment Length: | 430 | Identity: | 100/430 - (23%) |
---|---|---|---|
Similarity: | 173/430 - (40%) | Gaps: | 83/430 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DPDN-----DIYAFYDIRGYKGKCRPGRPNSERILQPRMSLLG---------KPLNYNR------ 46
Fly 47 -------GTRRDVRYRRLQSRLYNFLERPR-GLHAIFYHVMVFLMVFTCLALSVFSTIKEYEEDA 103
Fly 104 VY-------ILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTIL--- 158
Fly 159 ASIVVLGMGTS--GQVFATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQEL-ITTMYIG 220
Fly 221 FLGLIFASFLVYMWEKDVNDK-FSNFAQALWWGVITLCTVGYGDMVPITWQGKLIASCCALLGIS 284
Fly 285 FFALPAGILGSGFALKVQQQQRQKHMIRRRQPAATLIQAVWRCYAADEHSVSVATWNIHRVALPS 349
Fly 350 PPASR-----------ASSSFKHNTSFVARLPTIRRHKSQ 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 64/218 (29%) |
Ion_trans_2 | 221..295 | CDD:285168 | 29/74 (39%) | ||
KCNQ_channel | <619..719 | CDD:281513 | |||
kcnf1 | NP_001096396.1 | BTB | 23..124 | CDD:321966 | 10/43 (23%) |
Ion_trans | 179..415 | CDD:306908 | 70/246 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |