Sequence 1: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001082998.2 | Gene: | kcnc2 / 100037377 | ZFINID: | ZDB-GENE-070410-118 | Length: | 597 | Species: | Danio rerio |
Alignment Length: | 312 | Identity: | 85/312 - (27%) |
---|---|---|---|
Similarity: | 142/312 - (45%) | Gaps: | 53/312 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 RYRRLQSRLYNFLERPRGLHAI-------FYHVMVFLMVFTCLALSVFSTI-------------- 96
Fly 97 --KEYEEDAVYILFRMEILVVIWFTMEFGARLWSSGCRSRYQGCLGRLKFVKRPFCIIDIVTILA 159
Fly 160 SIVVLGM-GTSGQVF--ATSALRGLRFFQILRMVRMDRRGGTWKLLGSVVYAHRQELITTMYIGF 221
Fly 222 LGLIFASFLVYMWEK---DVND-------KFSNFAQALWWGVITLCTVGYGDMVPITWQGKLIAS 276
Fly 277 CCALLGISFFALPAGIL----GSGFALKVQQQ----QRQKHMIRRRQPAATL 320 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 66/225 (29%) |
Ion_trans_2 | 221..295 | CDD:285168 | 28/87 (32%) | ||
KCNQ_channel | <619..719 | CDD:281513 | |||
kcnc2 | NP_001082998.2 | amino terminal assembly domain | 1..185 | 7/21 (33%) | |
BTB | 10..123 | CDD:197585 | |||
BTB_2 | 10..115 | CDD:280393 | |||
S1-S6 membrane domain | 186..504 | 78/289 (27%) | |||
Ion_trans | 235..442 | CDD:278921 | 64/215 (30%) | ||
Ion_trans_2 | <385..432 | CDD:285168 | 20/46 (43%) | ||
post S6 proximal carboxyl terminal domain | 505..560 | ||||
distal carboxyl terminus | 561..597 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |