DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and znf668

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001012507.1 Gene:znf668 / 797423 ZFINID:ZDB-GENE-041001-46 Length:643 Species:Danio rerio


Alignment Length:679 Identity:164/679 - (24%)
Similarity:242/679 - (35%) Gaps:158/679 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 EVDNIPEYLATVVK------TSFEKLTFQWCTVCKHCSLKCPTFESLFSHLSKAH-KSRRDVYEC 363
            |:||:||. ||..:      .|..  ||:    |..|.....:..:|.||....| |.::..|.|
Zfish    27 ELDNVPEQ-ATRRRGKGRPPKSLH--TFK----CSSCQEVFTSPSALQSHKLSVHGKDKQQQYTC 84

  Fly   364 PIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRS 428
              ..|.|....|..|:.| ...|:|  :.|.  .|.:|:..:....:...||.:|..:|.    .
Zfish    85 --GKCTKMFSTRAQLSKH-QRSHSP--QRPF--QCLQCQKAYKTPTELRNHSRSHTGEKP----F 138

  Fly   429 YCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDR 493
            .|..|...|........|...| ...||.:|.:|..:...:.:|..| ..||......||..|.:
Zfish   139 VCLDCGKAFMQAICLRIHMTQH-SGERPHSCPLCSKSYPTLSKLKVH-QRSHTGEKPYFCAECGK 201

  Fly   494 TFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCELCSREFATEATY 558
            :|.||||:.:|.::|  :....|||::|...:.....|..|.|:..|                  
Zfish   202 SFADPSVYRKHRRNH--LGHRPYSCAQCGKTYTELKDLKNHERSHTG------------------ 246

  Fly   559 NIHMKKHLIIEKDVHVCSTCGLLSDSRETLLAHVNSVKTACFGSKIDVELLRDAYVCEYCSSYFK 623
                      ||. ::||.||.......:|..|:.            :......|.||.|...|.
Zfish   247 ----------EKP-YLCSDCGKAFSRSSSLACHLR------------IHSKSKPYQCEQCGKGFT 288

  Fly   624 EKDCLQAH--RDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQ 686
            :....|:|  ..||   :..|||..|||.|.....:|.|.|.:|..:.            |.||:
Zfish   289 QLSSYQSHLRTHSG---EKPFLCPQCGKMFSDPSSFRRHQRAHQGFKP------------YPCDK 338

  Fly   687 ENCTESYVNWNSLYTHKRRTHESASKQAEKSSKSAQEWVCQFCLKECRSKMSLSVHVARSHNNDN 751
              ||:.:.....|..| :|.|           ...:.:.||.|.|...:...|..|:........
Zfish   339 --CTKRFRQPADLAVH-QRVH-----------SGQRPYKCQRCDKAFVASWDLRRHMLVHSGLRP 389

  Fly   752 VTCPLCNSSYKSHDALAKH---HAYWHEPIECPECFK--IVKN--RRNYDTHVN----VVHSNKK 805
            ..|..|..|:....:|.||   |: ...|.:|..|||  :|.:  |::..||::    .||...:
Zfish   390 FACTECGKSFTERSSLNKHRRVHS-GERPYKCQLCFKSFVVSSSLRKHERTHLSERPIQVHVTPE 453

  Fly   806 ----------RYSCSVCQKGFYHKSEMEAHQKLHGQS--------------YSCEQCSFTTRNKK 846
                      ::|||.|...|....|::||..||..|              :.|..|.....|..
Zfish   454 SASVFPGTLPQFSCSHCDMIFGTWEEVQAHTSLHTISPPSDPSVLAVPVSPHVCVTCQEEFVNLA 518

  Fly   847 SLSVHVLGQHYKRFAFECNVCKKRFGRSQGLKTHMQRAHGDKYTCRDYFDGGCGRTFVNSSQLNV 911
            .|..|. ..|.|.....|:.|.|.|....||:.| ||.|...   |.:....||:.|:.::.|..
Zfish   519 DLQAHE-KLHPKPRPHICDQCGKGFLNKAGLRKH-QRIHSSN---RPHSCNVCGKAFLFAAYLRK 578

  Fly   912 HVRKIHDGIILLQEDVVEEDEYITDDAPS 940
            |:|...|                |:.:||
Zfish   579 HLRTHRD----------------TESSPS 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 8/19 (42%)
C2H2 Zn finger 518..538 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 0/19 (0%)
C2H2 Zn finger 575..596 CDD:275371 6/20 (30%)
C2H2 Zn finger 754..775 CDD:275368 7/23 (30%)
C2H2 Zn finger 780..801 CDD:275368 8/28 (29%)
C2H2 Zn finger 809..829 CDD:275368 7/19 (37%)
SUF4-like 852..>891 CDD:411020 12/38 (32%)
C2H2 Zn finger 864..885 CDD:411020 9/20 (45%)
C2H2 Zn finger 864..885 CDD:275368 9/20 (45%)
C2H2 Zn finger 891..917 CDD:275368 7/25 (28%)
znf668NP_001012507.1 C2H2 Zn finger 53..74 CDD:275368 5/20 (25%)
COG5048 <55..263 CDD:227381 59/251 (24%)
C2H2 Zn finger 84..104 CDD:275368 6/22 (27%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
COG5048 164..540 CDD:227381 107/450 (24%)
C2H2 Zn finger 168..188 CDD:275368 4/20 (20%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 6/31 (19%)
C2H2 Zn finger 280..300 CDD:275368 6/19 (32%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
C2H2 Zn finger 336..356 CDD:275368 7/22 (32%)
C2H2 Zn finger 364..384 CDD:275368 6/19 (32%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 507..527 CDD:275368 5/20 (25%)
C2H2 Zn finger 535..555 CDD:275368 9/20 (45%)
C2H2 Zn finger 563..583 CDD:275368 6/19 (32%)

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