DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and ZNF90

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:587 Identity:151/587 - (25%)
Similarity:226/587 - (38%) Gaps:118/587 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 HAPVAEIPI------YGSCPECKL--TFSNIL--QYNKHSCAHV-IKK-----------KRGFRS 428
            |..:|:.|:      ...|||..|  :|..::  :|.|....:: :||           |||:..
Human    68 HEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESVDEGKVHKRGYNG 132

  Fly   429 YCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGT----LFCD 489
             ...|.....|                  ..|.|| ....:..:|.:.| .|:...|    ..|.
Human   133 -LNQCLTATQS------------------KVFQCD-TYVKVSHIFSNSN-RHKIRDTGKKPFKCI 176

  Fly   490 LCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSV-ISCELCSREFA 553
            .|.:.|...|....|.|.|  ....|..|.||...|.....|..|.|...|.. ..||.|.:|..
Human   177 ECGKAFNQSSTLATHKKIH--TGEITCKCEECGKAFNRSSHLTSHKRIHTGEKRYKCEDCGKELK 239

  Fly   554 TEATYNIHMKKHLIIEKDVHVCSTCGLLSDSRETLLAHVNSVKTA--------CFGSKIDVELL- 609
            ..:|...|.:.|...::  :.|..||.......||.|| ..:.|.        |..:.|...:| 
Human   240 YSSTLTAHKRIHTGEKR--YKCEDCGKELKYSSTLTAH-KRIHTGEKPYKCDKCGRAFISSSILY 301

  Fly   610 --------RDAYVCEYCSSYFKEKDCLQAHRDSGVHK-DGVFLCQPCGKEFPHMKLYRHHLRNYQ 665
                    ...|.||.|...||....|..|:  .:|. :..:.|:.|||.|....:.|       
Human   302 VHKISHTEEKPYKCEECGKAFKLSSILSTHK--RIHTGEKPYKCEECGKAFRRSLVLR------- 357

  Fly   666 QLRSDSTHRRLEICVY-YMCDQENCTESYVNWNSLYTHKRRTHESASKQAEKSSKSAQEWVCQFC 729
                  ||:|:..... |.||:  |.:::::.:.||.||       ...:||     :.:.|:.|
Human   358 ------THKRIHTGEKPYKCDK--CGKAFISSSLLYKHK-------ISHSEK-----KPYKCEEC 402

  Fly   730 LKECRSKMSLSVHVARSHNNDN-VTCPLCNSSYKSHDALAKH---HAYWHEPIECPECFKIVKNR 790
            .|..:...:|::|.. ||..:. ..|..|:..:|...||:.|   |: ..:|.:|.||.|..|..
Human   403 GKAFKRSSTLTIHKI-SHTEEKPYKCQECDKVFKRSSALSTHKIIHS-GEKPYKCEECGKAFKRS 465

  Fly   791 RNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLH-GQS-YSCEQCSFTTRNKKSLSVHVL 853
            .|..|| .:.|:.:|.|.|..|.|.|.:.|.:..|:.:| |:: |.||:|....:....||.|.:
Human   466 SNLTTH-KISHTEEKLYKCQECDKAFKYSSALSTHKIIHSGENPYKCEECGKAFKRSSVLSKHKI 529

  Fly   854 GQHYKRFAFECNVCKKRFGRSQGLKTHMQRAHGDK-YTCRDYFDGGCGRTFVNSSQLNVHVRKIH 917
             .|.....::|..|.|.|.||..|.:|.....|:| |.|.:     ||:.|..||.||.| ::||
Human   530 -IHTGAKPYKCEECGKAFKRSSQLTSHKISHTGEKPYKCEE-----CGKAFNLSSDLNTH-KRIH 587

  Fly   918 DG 919
            .|
Human   588 IG 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..596 CDD:275371 7/20 (35%)
C2H2 Zn finger 754..775 CDD:275368 7/23 (30%)
C2H2 Zn finger 780..801 CDD:275368 8/20 (40%)
C2H2 Zn finger 809..829 CDD:275368 6/19 (32%)
SUF4-like 852..>891 CDD:411020 12/39 (31%)
C2H2 Zn finger 864..885 CDD:411020 8/20 (40%)
C2H2 Zn finger 864..885 CDD:275368 8/20 (40%)
C2H2 Zn finger 891..917 CDD:275368 9/25 (36%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
C2H2 Zn finger 175..195 CDD:275368 6/19 (32%)
COG5048 202..588 CDD:227381 117/427 (27%)
C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..279 CDD:275368 7/20 (35%)
C2H2 Zn finger 287..307 CDD:275368 3/19 (16%)
C2H2 Zn finger 315..335 CDD:275368 7/21 (33%)
C2H2 Zn finger 343..363 CDD:275368 9/32 (28%)
C2H2 Zn finger 371..391 CDD:275368 7/28 (25%)
C2H2 Zn finger 399..419 CDD:275368 5/20 (25%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 455..475 CDD:275368 8/20 (40%)
C2H2 Zn finger 483..503 CDD:275368 6/19 (32%)
C2H2 Zn finger 511..531 CDD:275368 6/20 (30%)
C2H2 Zn finger 539..559 CDD:275368 8/19 (42%)
C2H2 Zn finger 567..587 CDD:275368 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.

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