DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18011 and znf646

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_689700.2 Gene:znf646 / 561201 ZFINID:ZDB-GENE-160627-3 Length:1549 Species:Danio rerio


Alignment Length:903 Identity:201/903 - (22%)
Similarity:315/903 - (34%) Gaps:253/903 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 TEDAVSKSEPKLVSKVADQEHFSVLIQNILDEEEAVVEDETAVKEES----------SEAVQVTE 220
            |.||.|.|.|.|||.|                  .|..||.:..::|          .|:....:
Zfish   694 THDAPSASGPSLVSSV------------------EVKRDEQSENQQSDCGLIICSQCGESFAEQQ 740

  Fly   221 ETEAPGQIVILNSEAVTDTNPDENVYIYEHEDVMDPNLDNVKVKPISCSS---------RLVAQA 276
            :.:| .|::..|.|    :||.|. :..:|::.:.|   .|:::.:.|..         .|....
Zfish   741 DLQA-HQLLHSNIE----SNPQEQ-FASDHQNELKP---KVEMESVICGKCGFSCIDLYHLNNHN 796

  Fly   277 EESQSDDDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLATVVKTSFEKLTFQWCTVCKHCSLKCP 341
            ...|.|..:.|......:|.:...|...|.:....:|                  .|..|.....
Zfish   797 CTGQRDGQVREKSVKKPLLRSTFQIHNFDGLHGERQY------------------KCDQCGRSYR 843

  Fly   342 TFESLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFS 406
            ...||.:| .|:|.:  .|:.|.:  |.|.......|..| ...|..|.:    ..|.||...|.
Zfish   844 HAGSLLNH-KKSHNT--GVFRCFV--CQKRFYNLLALKNH-QRTHFDVKK----HRCAECGKAFK 898

  Fly   407 NILQYNKHSCAHVIKKKR---------------GFRSYCEMCSLEFPSWKRFNFHSQFHLEKH-- 454
            ...|...|...|...|.:               |..|...|.||..||.||.   |:.|.::.  
Zfish   899 IYKQLLNHQRVHQENKAKIEELNKQIQTLMQMSGNASVSGMQSLNNPSRKRM---SRRHKQRQTS 960

  Fly   455 -------------------RPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPSV 500
                               ||..|..|..:..:...|..|.| ||: .|..:|.||:.|:.:...
Zfish   961 TSDQSSQEKEAQKRDPRDPRPFVCDQCGRSYRHAGSLVNHKN-SHK-TGEYYCALCNNTYSNQLA 1023

  Fly   501 FMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCELCSREFATEATYNIHMKKH 565
            ...|.:.|..|.  .:.|.:|...|....:|..|         :|....|..|.:.  .:..:|.
Zfish  1024 MKNHLRIHFAVK--RHRCQDCGKAFRGNKQLLNH---------TCSTKKRNAAPKG--KVRGRKQ 1075

  Fly   566 LIIEKDVHVCSTCGLLSDSRETLLAH-VNSVKTACFG------SKIDVELLRDAYVCEYCSSYFK 623
               |||:. |..|.|:....|.|..| .:.|.....|      .:..|:.....:.|..|...::
Zfish  1076 ---EKDLK-CKHCRLVFPDHELLQGHSCSEVPVPDLGPQGSDNHRAAVQKEERPFKCNICGRSYR 1136

  Fly   624 EKDCLQAHRDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNYQQ------------LRSDS---TH 673
            ....|..|:::  ||.|:|.|..|.|.|.:....|:|.|.:.|            .|..|   .|
Zfish  1137 HAGSLLNHKNT--HKTGLFTCSFCAKPFSNPMALRNHTRIHTQKKKYVCPTCGKAFRLSSILYNH 1199

  Fly   674 RRLEI--CVYYMCDQENCTESYVNWNSLYTHKRRTHESASKQAEKSSKSAQE-WVCQFCLKECRS 735
            :::..  ..:|.|  :.|.:|:...:.|..|  |.:.:.:.:::.:..|:.: :.|..|.:..|.
Zfish  1200 QKIHARGVSHYSC--QTCGKSFQGKSGLKRH--RCYRNGNPKSDVNQDSSDKCYTCDQCGRSYRH 1260

  Fly   736 KMSLSVHVARSHNNDNVTCPLCNSSY------KSHDALAKHHAYWHEPIECPECFKIVKNRRNYD 794
            ..||..| .::|:.|.:.|.||..::      :||..:|:|.        ||:|.|......:..
Zfish  1261 AGSLLNH-KKTHSADLLNCTLCLKTFTDPRELESHSQMARHC--------CPDCGKTFCEFAHLQ 1316

  Fly   795 THVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLHG----------------------------- 830
            :|:. |||....|.|||||:.|.:....:.||:|||                             
Zfish  1317 SHME-VHSKGLPYYCSVCQQNFPNLVSFQQHQELHGNLQGQSHQEQGMAMQQGLDWDAGLDQQIG 1380

  Fly   831 ----------------------------------QSYSCEQCSFTTRNKKSLSVHVLGQHYKRFA 861
                                              :|:.||.|..|.|:..||..|  ...:|..:
Zfish  1381 VQSLPKIDSAFSRVHGFPEPQDQQESSEGFDREEKSHVCEHCGRTYRHAGSLLNH--KNSHKMGS 1443

  Fly   862 FECNVCKKRFGRSQGLKTHMQRAHGD--KYTCRDYFDGGCGRTFVNSSQLNVHVRKIH 917
            |.|:||:|.|.....||.| :|.|.:  :|.|.:     ||:.|..|:||..| |:||
Zfish  1444 FFCSVCQKEFTNLMALKNH-RRIHTEPKRYQCLE-----CGKAFRVSTQLICH-RRIH 1494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 5/19 (26%)
C2H2 Zn finger 518..538 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 3/19 (16%)
C2H2 Zn finger 575..596 CDD:275371 6/21 (29%)
C2H2 Zn finger 754..775 CDD:275368 7/26 (27%)
C2H2 Zn finger 780..801 CDD:275368 5/20 (25%)
C2H2 Zn finger 809..829 CDD:275368 8/19 (42%)
SUF4-like 852..>891 CDD:411020 13/40 (33%)
C2H2 Zn finger 864..885 CDD:411020 9/20 (45%)
C2H2 Zn finger 864..885 CDD:275368 9/20 (45%)
C2H2 Zn finger 891..917 CDD:275368 9/25 (36%)
znf646XP_689700.2 COG5048 69..473 CDD:227381
C2H2 Zn finger 72..92 CDD:275368
zf-H2C2_2 84..107 CDD:463886
C2H2 Zn finger 100..120 CDD:275368
C2H2 Zn finger 204..224 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 779..822 CDD:275368 6/42 (14%)
C2H2 Zn finger 835..855 CDD:275368 6/20 (30%)
C2H2 Zn finger 862..882 CDD:275368 5/22 (23%)
C2H2 Zn finger 890..910 CDD:275368 6/19 (32%)
C2H2 Zn finger 984..1004 CDD:275368 5/20 (25%)
PHA00733 <994..1063 CDD:177301 19/81 (23%)
C2H2 Zn finger 1011..1031 CDD:275368 5/19 (26%)
C2H2 Zn finger 1039..1055 CDD:275368 4/15 (27%)
C2H2 Zn finger 1081..1097 CDD:275368 5/15 (33%)
C2H2 Zn finger 1128..1148 CDD:275368 4/21 (19%)
PHA00733 <1153..1199 CDD:177301 11/45 (24%)
C2H2 Zn finger 1155..1175 CDD:275368 7/19 (37%)
C2H2 Zn finger 1183..1203 CDD:275368 3/19 (16%)
SUF4-like 1186..>1228 CDD:411020 8/43 (19%)
C2H2 Zn finger 1186..1209 CDD:411020 3/22 (14%)
C2H2 Zn finger 1212..1232 CDD:275368 6/23 (26%)
C2H2 Zn finger 1251..1271 CDD:275368 6/20 (30%)
C2H2 Zn finger 1302..1322 CDD:275368 5/20 (25%)
C2H2 Zn finger 1330..1350 CDD:275368 8/19 (42%)
C2H2 Zn finger 1419..1439 CDD:275368 8/21 (38%)
C2H2 Zn finger 1446..1466 CDD:275368 9/20 (45%)
C2H2 Zn finger 1474..1494 CDD:275368 9/25 (36%)
C2H2 Zn finger 1502..1522 CDD:275368
C2H2 Zn finger 45..65 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.