DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18011 and drll.3

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001289162.1 Gene:drll.3 / 555591 ZFINID:ZDB-GENE-060531-126 Length:631 Species:Danio rerio


Alignment Length:636 Identity:149/636 - (23%)
Similarity:227/636 - (35%) Gaps:183/636 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 CKHCSLKCPTFESLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGS 397
            |.||..:......|..|:...:|              |:.|.||..|..   ||          :
Zfish    47 CFHCKKRFTCKAHLQVHMRVHNK--------------KKQKDRKATAEK---LH----------T 84

  Fly   398 CPECKLTFSNILQYNKHSCAHVIKKKRGFRSYCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVC 462
            |.:...:|:......||...|..:||.    .|:.|...||        .:.:||:|        
Zfish    85 CDKSGKSFAYKSSLKKHMINHSGEKKH----TCDQCGKSFP--------FKVYLEQH-------- 129

  Fly   463 DYATTNIDELFQHLNYS-HEPVGTLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFE 526
                     :..|...: ||      ||.|.::||.......|...|  .....:.|.:|..:|.
Zfish   130 ---------MLIHTGETLHE------CDQCGKSFRSKGEVKIHMLIH--TGEKPHKCDQCGKSFR 177

  Fly   527 SRGRLNGHMRAMHG-SVISCELCSREFATEATYNIHMKKHLIIEKDVHVCSTCGLLSDSRETLLA 590
            |:|.:..||....| ....|:.|.:.|.::....|||..|  ..|..|.|..||....|:..:..
Zfish   178 SKGEVKIHMLIHTGEKPHECDQCGKSFRSKGEVKIHMLIH--TRKKPHECDQCGKSFRSKGEVKQ 240

  Fly   591 HVNSVKTACFGSKIDVELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHK-DGVFLCQPCGKEFPHM 654
            |: |:.|   |.|        .|.||.|..:|.:|:.||.|..  ||. :..:.|..|||.||:.
Zfish   241 HM-SIHT---GLK--------PYKCEECGKFFAQKNNLQVHMK--VHTGEKPYRCDQCGKCFPYK 291

  Fly   655 KLYRHHLRNYQQ---LRSDSTHRRLEICVY-------------YMCDQENCTESYVNWNSLYTH- 702
            :..:.||..:.:   ...|...:..:.|:.             |.|||  |.:||...:.|..| 
Zfish   292 QSLKLHLEIHAKGNPYTCDECGKSFKTCLQFRSHMTLHPEYKPYKCDQ--CEKSYGREDHLQRHM 354

  Fly   703 KRRTHESASKQAEKSSKSAQEWVCQFCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSYKSHDAL 767
            |..|.|...|                                         |..|..|::..|.|
Zfish   355 KYHTGEKPHK-----------------------------------------CEHCGKSFQMRDLL 378

  Fly   768 AKHHAYWHE--PIECPECFKIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLH- 829
            ..|.....|  |..|.:|.|....::.|:.|:| :|:.::.|:|..|.|||.::..:..|.:.| 
Zfish   379 RSHLMVHREVKPYTCDQCGKGFTLKKCYNEHMN-IHTGERPYTCDQCGKGFPYEQSLNLHMRFHR 442

  Fly   830 ----------GQS-------------------YSCEQCSFTTRNKKSLSVHVLGQHYKRFAFECN 865
                      |||                   |:|:||..:.|:..||.:| :..|.....|.|:
Zfish   443 GEKPFTCDQCGQSFSQKGAYNIHMKIHTGEKPYTCDQCGMSFRHGSSLKLH-MTHHTGEKPFHCD 506

  Fly   866 VCKKRFGRSQGLKTHMQRAHGDK-YTCRDYFDGGCGRTFVNSSQLNVHVRK 915
            .|.|.:..:..||.||:..:.|: |:|..     ||:||.....|.:|.::
Zfish   507 QCDKCYSTALFLKNHMKTHNKDQIYSCLT-----CGKTFNLLGCLRMHEKR 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..596 CDD:275371 6/20 (30%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 6/20 (30%)
C2H2 Zn finger 809..829 CDD:275368 6/19 (32%)
SUF4-like 852..>891 CDD:411020 11/39 (28%)
C2H2 Zn finger 864..885 CDD:411020 7/20 (35%)
C2H2 Zn finger 864..885 CDD:275368 7/20 (35%)
C2H2 Zn finger 891..917 CDD:275368 7/25 (28%)
drll.3NP_001289162.1 C2H2 Zn finger 47..67 CDD:275368 5/19 (26%)
C2H2 Zn finger 85..105 CDD:275368 4/19 (21%)
C2H2 Zn finger 113..133 CDD:275368 7/44 (16%)
C2H2 Zn finger 141..161 CDD:275368 6/19 (32%)
COG5048 165..605 CDD:227381 112/454 (25%)
C2H2 Zn finger 169..189 CDD:275368 7/19 (37%)
C2H2 Zn finger 197..217 CDD:275368 6/19 (32%)
C2H2 Zn finger 225..245 CDD:275368 6/20 (30%)
C2H2 Zn finger 253..273 CDD:275368 8/21 (38%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 309..329 CDD:275368 2/19 (11%)
C2H2 Zn finger 337..357 CDD:275368 9/21 (43%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
C2H2 Zn finger 393..413 CDD:275368 6/20 (30%)
C2H2 Zn finger 421..441 CDD:275368 6/19 (32%)
C2H2 Zn finger 449..469 CDD:275368 3/19 (16%)
C2H2 Zn finger 477..497 CDD:275368 7/20 (35%)
C2H2 Zn finger 505..525 CDD:275368 7/19 (37%)
C2H2 Zn finger 533..553 CDD:275368 7/25 (28%)
C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 589..609 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.