DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG17803

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:653 Identity:126/653 - (19%)
Similarity:223/653 - (34%) Gaps:200/653 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 SSRLVAQAE-ESQSDDDIDEGETSNVVLFNFVD--IKEKDEVDNIPEYLATVVKTSFEKLTF--- 327
            |||..:.:: ..||:|:.|...:|..|....|.  :.|.|:.|........:..|:.:...|   
  Fly     3 SSRTASDSKWVRQSNDNKDTMRSSRQVNKKLVKLFLAEADDSDATCTTSTALDTTTADSAFFDSD 67

  Fly   328 --QWCTVCKHC----SLKCPTFESLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLAMHLVLLH 386
              :..|..:.|    :.||.|...:.|.    |:..:|:|:                .:::.|||
  Fly    68 FEEESTGLQECDPPPASKCRTCFRIISR----HEDAQDLYD----------------RVNIALLH 112

  Fly   387 -----------APVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRSYCEMCSLEFPSW 440
                       ..|.|:| :..|..|:.|.:..::: :..|..|.||.|             .:.
  Fly   113 HIKVITGVWIQQGVKELP-HHICSTCQETVNKSMEF-RAKCQQVDKKLR-------------QTT 162

  Fly   441 KRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHL-NYSHEP--------VGTLFCDLCDRTFR 496
            :::|..              :||      :|:...| |..:|.        ||  ..|.......
  Fly   163 EKYNIQ--------------ICD------EEMESELENVLYEESAQQAKGVVG--LEDFSSELLP 205

  Fly   497 DPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCELCSREFATEATYNIH 561
            |....::.:....:...|.:|.||...:.:..                   ..::||.|  .|..
  Fly   206 DSEGVLDEDDFPLDAEPTQFSLSEDELDLDRD-------------------TEKDFALE--QNKS 249

  Fly   562 MKKHLIIEKDVHVCST---CGLLSDSR---ETLLAHVNSVKTACFGSKIDVEL-----LRDA--- 612
            ..:.:.|.|    |.|   .|.:....   :.:|...||:|..  ..|..:.|     ||.:   
  Fly   250 CNEIISIRK----CKTKEEIGKVDHGAKVYKVVLGEYNSLKET--APKYSLSLPKKPQLRVSPEE 308

  Fly   613 ---------------YVCEYCSSYFKEKDCLQAH--RDSGVHKDGVFLCQPCGKEFPHMKLYRHH 660
                           |||:.|...|:::..||.|  |.:....   |.|..|.|:|..:.....|
  Fly   309 KNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKN---FECPECPKKFYDLYTRNIH 370

  Fly   661 LRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHESASK---QAEKSSKSAQ 722
            :|...:    ..|.       :.|:  :|.||:.|.:|.:.|:|..|.:.::   :.:...:.:.
  Fly   371 VRALHK----GEHP-------FPCN--HCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSS 422

  Fly   723 EWVCQFCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSYKSHDALAKHHAYWHE--PIECPECFK 785
            ...|..|.|...||..|.:|:...:.:....|.:|...:....|:.:|.|. |:  ||.      
  Fly   423 RHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQAL-HDKFPIR------ 480

  Fly   786 IVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLHG--QSYSCEQCSFTTRNKKSL 848
                                   |.:|.|||..:|::..||.:|.  ..:.||.|....|::.:|
  Fly   481 -----------------------CDICLKGFLLRSQLTKHQDVHTGMHPHRCEICDVHYRHRYNL 522

  Fly   849 SVH 851
            :.|
  Fly   523 NKH 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 2/19 (11%)
C2H2 Zn finger 518..538 CDD:275368 2/19 (11%)
C2H2 Zn finger 545..565 CDD:275368 4/19 (21%)
C2H2 Zn finger 575..596 CDD:275371 6/26 (23%)
C2H2 Zn finger 754..775 CDD:275368 5/20 (25%)
C2H2 Zn finger 780..801 CDD:275368 0/20 (0%)
C2H2 Zn finger 809..829 CDD:275368 8/19 (42%)
SUF4-like 852..>891 CDD:411020 126/653 (19%)
C2H2 Zn finger 864..885 CDD:411020
C2H2 Zn finger 864..885 CDD:275368
C2H2 Zn finger 891..917 CDD:275368
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 20/108 (19%)
SUF4-like 320..>376 CDD:411020 16/58 (28%)
C2H2 Zn finger 323..351 CDD:411020 9/27 (33%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..375 CDD:411020 6/20 (30%)
C2H2 Zn finger 354..375 CDD:275368 6/20 (30%)
C2H2 Zn finger 383..401 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
C2H2 Zn finger 454..474 CDD:275368 5/20 (25%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 509..528 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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