DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG3281

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:525 Identity:118/525 - (22%)
Similarity:199/525 - (37%) Gaps:137/525 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   502 MEHNKSHANVSSTTYSCSECMANFESRGRLNGHMR---------------------------AMH 539
            |:..:.|.|:||.|  |..|:...|:...::..::                           .||
  Fly     1 MDTPEIHVNISSQT--CRVCLETHETNLYVHDEIKYNDLKLELWQLLEAVSKLKWTWTDPNLPMH 63

  Fly   540 GSVISCELCSR------------EFATEATYNIHMKKHLIIEKD-VHVCSTCGLLSDSRETLLAH 591
                .|:.|:|            |.|.|...|:..::.:..:.| ||| ....|:  .::.:::.
  Fly    64 ----LCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHV-DVVELI--DQDDVVSM 121

  Fly   592 VNSVKTACFGSKIDVELLRDAYVCEYCSSYFKE--KDCLQAHRDSGVHKDGVFLCQPCGKEFPHM 654
            ...:.|:.....:::|   :.|..:.||::..:  ::.|.|..|.....:..|..:|...|..:.
  Fly   122 AQYLSTSFAEQHVEME---EKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENR 183

  Fly   655 KLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHESASKQAEKSSK 719
            :|.|.     .||.|...|....|   |.|  ..|...:....||..|..:.|:..:..|  :.|
  Fly   184 ELSRP-----SQLGSRLNHSANFI---YKC--AVCPRVFAKSESLTRHFSQAHKLTADVA--AMK 236

  Fly   720 SAQEWVCQFCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSYKSHDALAKHHAYWH------EPI 778
            .|.|        .|.:.:              :||..|..::|..|.|.:|...:|      ||.
  Fly   237 LANE--------SCGTGL--------------LTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPE 279

  Fly   779 E---------------CPEC---FKIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAH 825
            |               ||.|   |.:    .:...|:. .|:....|.|..|:|.|....::..|
  Fly   280 ETTDNSARKRIAKRRDCPHCGLSFPV----SSLTIHIR-RHTGDNPYKCDQCEKAFPRSQDLSLH 339

  Fly   826 QKLH-GQSYS-CEQCSFTTRNKKSLSVHVLGQHYK----RFAFECNVCKKRFGRSQGLKTHMQRA 884
            .:.| |:..| |:.||     ||.:|.:.|.:|.:    :..:.|.:|.|.|.:|..||.||:|.
  Fly   340 MRQHTGERPSECKICS-----KKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRH 399

  Fly   885 HGDK-YTCRDYFDGGCGRTFVNSSQLNVH-VRKIHDGIILLQEDVVEEDEYITDDAPSTSKKRRL 947
            .|:: |.|     |.||.:||..|.||:| .||.|...::...:|  |..:..|...:....:|.
  Fly   400 TGERPYQC-----GVCGESFVCGSHLNIHRNRKGHLIAVIPGNEV--EANFAADPYVNARVNQRR 457

  Fly   948 NENNE 952
            :|:.|
  Fly   458 SEDIE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 1/5 (20%)
C2H2 Zn finger 518..538 CDD:275368 3/46 (7%)
C2H2 Zn finger 545..565 CDD:275368 7/31 (23%)
C2H2 Zn finger 575..596 CDD:275371 1/20 (5%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 5/23 (22%)
C2H2 Zn finger 809..829 CDD:275368 5/19 (26%)
SUF4-like 852..>891 CDD:411020 14/43 (33%)
C2H2 Zn finger 864..885 CDD:411020 10/20 (50%)
C2H2 Zn finger 864..885 CDD:275368 10/20 (50%)
C2H2 Zn finger 891..917 CDD:275368 12/26 (46%)
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 11/79 (14%)
C2H2 Zn finger 205..226 CDD:275368 5/22 (23%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 28/106 (26%)
C2H2 Zn finger 296..315 CDD:275368 5/23 (22%)
C2H2 Zn finger 323..343 CDD:275368 5/19 (26%)
C2H2 Zn finger 351..371 CDD:275368 8/24 (33%)
zf-H2C2_2 364..388 CDD:463886 6/23 (26%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:463886 12/29 (41%)
C2H2 Zn finger 407..424 CDD:275368 9/21 (43%)

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