DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18011 and CG6791

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:1324 Identity:232/1324 - (17%)
Similarity:368/1324 - (27%) Gaps:554/1324 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LFDIDELERERE--AAKDAAQGKDSKAEEDPIIITEVQATPPAAKPAKKTV-PSRPLTKVLRPVP 129
            |.|.:|.|||.|  ..|::.:.|....::|.:....::.....|:|.:.:: |:.|:::.:|| |
  Fly    56 LLDAEEDEREEEDDYEKNSKEPKQPDPDDDALFDFNMEPIVDIAEPQRPSLAPAGPMSQQVRP-P 119

  Fly   130 IIPTREPSARIRNRAAAASNVTPDTSRSPEPPETP---STEDAVSKSEPKLVSKVADQEHFSVLI 191
            :.....|.|..|.|..:..:|.|.||:.....|..   :.|..|....|....:...|:|:...:
  Fly   120 MQRHSFPGAGGRPRLGSGLSVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHM 184

  Fly   192 QNI-------------LDE-EEAVVEDETAVKEESSEAVQVTEETEAPGQIVILNSEAVTDTNPD 242
            .:|             ||: .:...|....:...|.|.:...:.|..|.:..             
  Fly   185 NHIHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCT------------- 236

  Fly   243 ENVYIYEHE-----DVMDPNLDNVKVKPISCSSRLVAQAEES----------------------- 279
             ..||.:.|     |:|      |.::.:.| ..:||...|.                       
  Fly   237 -KCYICKREYKYRQDLM------VHLRMVHC-DEVVAMMREGYNAAGRKTRVRESRTEQLLREKS 293

  Fly   280 -QSDDDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLATVV--KTSFEKLTFQWCT-----VCKHC 336
             :.:||:.| |:..:.:.|.:...:.||.....:.::..|  |.:..:...:.|.     :|..|
  Fly   294 FRENDDLGE-ESDRIEVRNELLEPDADESGTQEQTVSEEVSKKKAGTRGAAELCEDYIHYMCPDC 357

  Fly   337 SLKCPTFESLFSHLSKAHK--SRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCP 399
            ...|.|......|:...|.  |||               |..|.::.:.:            .|.
  Fly   358 GTDCDTHAQWSQHIEFVHDYVSRR---------------GLNFRSVDMQM------------QCL 395

  Fly   400 ECK--LTFSNILQYNKHSCAHVIKKKRGFRSYCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVC 462
            |||  :|.:.|.....|..:|                |..|.|.|                |.:|
  Fly   396 ECKKIVTPNTIKSLRAHKFSH----------------LSQPEWLR----------------CKLC 428

  Fly   463 DYATTNIDELFQHLNYSHEPVGTLFC---------------DLCD-----------RTFRDPSVF 501
            ....|:..|:.:||...|. :.||..               |.||           ....|...|
  Fly   429 YKGYTDHQEIIRHLLQQHH-MDTLMSEDAEEEDGDAPSAIEDECDGDNGNGEGNGAPLDEDSPYF 492

  Fly   502 MEHNKSHANVSS-------TTYSCSECMANFESRGRLNGHMRAMHG--------------SVISC 545
            .:..:....:||       ..|.|.:|...|..:.....|:...|.              ..:.|
  Fly   493 EDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQLKC 557

  Fly   546 ELCSREFATEATYNI-----HMKKHLIIEKDVHVCSTCGLLSDSRETLLAHV---------NSVK 596
            ..|.: ..|.| |.|     |...||.. |....|..|......|:.|:.|:         ..:.
  Fly   558 TECDK-IITNA-YGIQNAQQHRITHLPF-KAYARCRKCHKSYTDRKGLVKHLATHHRVGWPRKLS 619

  Fly   597 TAC-----------------------------------------FGSKIDVELLRD--------- 611
            ..|                                         ||.::..|  .|         
  Fly   620 GGCPAPILTPAKQPRKQIVTVANETYEIIYLDDVDQGGMEEDNDFGEQMQAE--EDEYPIAPPPP 682

  Fly   612 ---------------AYVCEYCSSYF----------KEKDC-----------LQAHRDSG---VH 637
                           .|.|.:|.:.|          .||.|           :.:..|..   |.
  Fly   683 SPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCRKTVVRRRRQPVMSSADPSVPTVE 747

  Fly   638 KDGVFLCQPCGKEFPHMKLYRHHL--------RNYQQLR------------------------SD 670
            ::.:|||..||.|:.....:|.|:        |.|..:|                        .|
  Fly   748 QNYIFLCPSCGFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQD 812

  Fly   671 STHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHE--------------------------- 708
            ...|.|...:|..|  ..|...|.:..::..|.|..|.                           
  Fly   813 HHFRHLPYRLYLKC--LICGTCYNHKPNIAAHLRARHSIFDRETPTMITKPKQVLGRYKDNSREN 875

  Fly   709 ----------------------SASKQAEKSSKSAQEWVCQFCLKECRSKM------------SL 739
                                  |:|..|..||:|         ||.....:            |:
  Fly   876 PKLPSPPPAPALAPAPPSPPACSSSAAASASSRS---------LKPQPGGLPARPAGLNTLEDSI 931

  Fly   740 SVHVARSHNNDNVTCPLCNSSYKSHDALAKH--------------------HAYWHEPIECPECF 784
            |.|.|...:.....||.||.::.||....||                    |.|.     |.||:
  Fly   932 SYHNAVDLDFITYFCPKCNQNFDSHAFWRKHIVEQHNFNSREGLNFRQIDNHHYL-----CLECY 991

  Fly   785 KIVKNRRNYDTH----VNVVHSNKKR------YSCSVCQKGFYHKSEMEAH---------QKLHG 830
            |     |...||    :..:.|:|.|      :.|..|...|..|.....|         .:.|.
  Fly   992 K-----RVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCGGEFVRKQMFFKHLNRDTNRCDNRPHR 1051

  Fly   831 Q----------------SYSCEQC--SFTTRNKKSLSVHVLGQHYKRFAFECNVCKKRFGRSQGL 877
            :                ..:|.||  :|.|.|||....|:...|               |.::..
  Fly  1052 EFDDDEPDQDTLLSTIYHLTCPQCGDNFKTHNKKEWREHINDHH---------------GLTKLE 1101

  Fly   878 KTHMQRAHGDKYTCRD-------------------------YF----------DGGCGRTFVNS- 906
            ..||.:...|.|.|:|                         |.          ||......::| 
  Fly  1102 LLHMTKVGEDVYRCQDCDEELETNRQWVLQFHRFQHLPHAAYIRCKLCKQSSADGADAVGELHSL 1166

  Fly   907 SQLNVHVRKIHDGI-----ILLQEDVVEEDEYITDDAPSTSKKRRLNENNEFIEEA-DGDDIVME 965
            .:|..|:||.|.|:     |.|.|.::::::                |..|..|:. ||::...:
  Fly  1167 RELQQHIRKHHPGLGDAEMISLIEQIIQDEK----------------EQEEGTEQTNDGENPTGQ 1215

  Fly   966 D------------DDEEADDFIDE 977
            |            ||:...:|.|:
  Fly  1216 DSGPYMPLPPHLLDDDGDVEFEDQ 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 5/45 (11%)
C2H2 Zn finger 518..538 CDD:275368 4/19 (21%)
C2H2 Zn finger 545..565 CDD:275368 7/24 (29%)
C2H2 Zn finger 575..596 CDD:275371 5/29 (17%)
C2H2 Zn finger 754..775 CDD:275368 10/40 (25%)
C2H2 Zn finger 780..801 CDD:275368 7/24 (29%)
C2H2 Zn finger 809..829 CDD:275368 5/28 (18%)
SUF4-like 852..>891 CDD:411020 6/38 (16%)
C2H2 Zn finger 864..885 CDD:411020 3/20 (15%)
C2H2 Zn finger 864..885 CDD:275368 3/20 (15%)
C2H2 Zn finger 891..917 CDD:275368 10/61 (16%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368 3/20 (15%)
C2H2 Zn finger 208..230 CDD:275368 3/21 (14%)
C2H2 Zn finger 235..256 CDD:275368 6/40 (15%)
C2H2 Zn finger 516..532 CDD:275368 3/15 (20%)
C2H2 Zn finger 557..580 CDD:275368 7/24 (29%)
C2H2 Zn finger 589..609 CDD:275368 5/19 (26%)
COG5236 <939..>1096 CDD:227561 36/181 (20%)

Return to query results.
Submit another query.