DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and pzg

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_649297.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:835 Identity:148/835 - (17%)
Similarity:255/835 - (30%) Gaps:242/835 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 DDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLATVVKTSFEKLTFQWCTVCKHCSLKCPTFE--- 344
            ||..|.:||      ..|:.........|..||.:|...|..:......||..|:.....::   
  Fly    87 DDRCEPQTS------LTDMCTTHTSTKFPNKLAQLVGEGFLVIVCGEDYVCSRCTNLVNYYDRLE 145

  Fly   345 --------SLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFL--AMHLVLLHAPVAEIPIYGSCP 399
                    :|.|.|:|.:....|:.:   || :..||.:|.:  :.:..|..:|.|::       
  Fly   146 NDVERVKTNLISLLNKKYAINEDMGQ---EG-SPPLKMQKMVGGSANRSLEESPSADL------- 199

  Fly   400 ECKLTFSNILQYNKHSCAHVIK-------------KKRGFRSY-CEMCSLEFPSWKRFNFHSQFH 450
               |....:||.|....:.:..             :::..:.| |..|..:....:.||.|  :.
  Fly   200 ---LRPRKLLQGNPVGQSKIAPGTTQSSVQGTQTVQRKATKIYKCTSCDYKTSDMRLFNTH--YE 259

  Fly   451 LEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPSVFMEH-NKSHAN---V 511
            ..|.:...|..|.....:...:.||:...|.......|.:|...|.:.:...:| ..:||.   |
  Fly   260 TCKQQTFQCKTCRKIFPHFGAMKQHMVRDHNTAMDNTCAMCHINFVNENSLRKHMETNHATNVLV 324

  Fly   512 SSTT-----------------------------YSCSECMANFESRGRLNGHMR---AMHGSVIS 544
            :|||                             |:|:.|......:...:.|||   |.......
  Fly   325 TSTTTIPASAAPVAAAAAAAAAAANENLVGTSLYTCNHCQFKSTDKVVFDEHMRKHAAGKPKPFK 389

  Fly   545 CELCSREFATEATYNIHMKKHLIIEKDVHVCSTCGLLSDSRETLLAHVN-----SVKTA----CF 600
            |.|||:.|.|.....:|.|:|   :.:...|.||.:....||.|:.|..     |..|.    ..
  Fly   390 CRLCSQRFETREAATVHAKQH---QTNFFKCGTCSMTFPKREMLVKHFEVHQSPSASTVSPKQSV 451

  Fly   601 GSKIDVELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNYQ 665
            ...::.:.|....:.|..|.................:....|.|..|...|.....|.||:    
  Fly   452 SQNLNTQKLLQETIDEALSDSLPASTAAVVATTESENNIRFFSCSICSLTFIQETYYNHHM---- 512

  Fly   666 QLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYT----------------------------- 701
                 .||||         |::..:......||..|                             
  Fly   513 -----ETHRR---------DKKATSAGATALNSAATALLSDEPGEATGKAGDESGEQNAEADIES 563

  Fly   702 --HKRRTHESASKQAEKSSKSAQEWVCQFCLKECRSKMSLSVHVAR------SHNNDNVTCPLCN 758
              .|..:.::.|.:|.|......|.|  ...:|....::.::.:.:      ..::.|.|.|:..
  Fly   564 LFEKLHSDKNESGEAPKPGSKGGEMV--ITSQEGSGGITFNITIPQPDGDQSQKDSPNTTAPVSV 626

  Fly   759 S------------------------SYKSHDALAKHHAYWHEPIECPECFKIVKNRRNYDTHVNV 799
            |                        |.::..|.:|.:|   .|:..|..        :.|.....
  Fly   627 SIDMPNLDQAEDESQSQGSIDAKGESGEASSADSKSNA---APVSMPSL--------DDDNEAAA 680

  Fly   800 VHSNKKRYSCSVCQKGFYHKSEMEAHQKLHGQSYSCEQCSFTTRNKKSLSVHVLGQHYKRFA--- 861
            ..:.....:.:..:.| ..|::.:|     |:|...::.:.....:.|....|:.   ||.|   
  Fly   681 AEAEASEETKTASKAG-QEKAKAKA-----GESAKSKEAAAAEEPQPSDEGDVVA---KREATDT 736

  Fly   862 ----FECNVCKKRFGRS-QGLKTHMQRAHGDKYTCRDYFDGGCGRTFVNSSQLNVHVRKIHDGII 921
                .|.|......|.| :|..|....|.|:.....    ||            .||        
  Fly   737 PTTESEANATTAEAGESGEGEVTASTGAEGEAGEAA----GG------------EHV-------- 777

  Fly   922 LLQEDVVEEDEYITDDAPSTSKKRRLNEN-------NEFIEEADGDDIVMEDDDE 969
                 .:|.||.:.........|..:|||       |..:.:|:|:.|:::|.::
  Fly   778 -----AMELDEAMQAQVEGGQIKFIVNENGHLLQLDNHILTDAEGNQIIVQDPEQ 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 4/20 (20%)
C2H2 Zn finger 518..538 CDD:275368 5/22 (23%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 575..596 CDD:275371 8/25 (32%)
C2H2 Zn finger 754..775 CDD:275368 6/44 (14%)
C2H2 Zn finger 780..801 CDD:275368 2/20 (10%)
C2H2 Zn finger 809..829 CDD:275368 3/19 (16%)
SUF4-like 852..>891 CDD:411020 12/46 (26%)
C2H2 Zn finger 864..885 CDD:411020 5/21 (24%)
C2H2 Zn finger 864..885 CDD:275368 5/21 (24%)
C2H2 Zn finger 891..917 CDD:275368 4/25 (16%)
pzgNP_649297.1 C2H2 Zn finger 241..263 CDD:275371 5/23 (22%)
C2H2 Zn finger 268..289 CDD:275371 4/20 (20%)
C2H2 Zn finger 297..318 CDD:275371 4/20 (20%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
zf-H2C2_2 373..399 CDD:463886 9/25 (36%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)

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