DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18011 and CG10654

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:649 Identity:126/649 - (19%)
Similarity:200/649 - (30%) Gaps:251/649 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ATTLPLD----AIRCQTV-----------------ISKLLGPLDTWEAKLR-------------- 167
            ||..|.|    .:||:::                 :|.||.|.:|..|.|:              
  Fly     4 ATQYPCDPEGVCMRCKSMPPPEESLTCGTCVTPWHVSCLLSPPETLSATLQWLCPDCSGETNPLP 68

  Fly   168 -VGKESGYNMV--------HFTPVQELGGSRSAYSLRNQLR-----VNPDFQ------SKGGKEV 212
             .|..:||..|        |.....|...:......:.||.     |:.|.:      |||.|.:
  Fly    69 VSGVAAGYGSVGSDLVAAIHSIEADETLSAEEKAKKKQQLLSGKGVVDEDDEEEKKKTSKGKKPI 133

  Fly   213 ---SYDDLAVLMRKMREEWNVASICDIVLNHTANESIWIREYPECSYN----------------C 258
               |:.:.:..|:.:::..:|.     ||...|...:|..|...|.:|                |
  Fly   134 DVLSHFECSFCMQSLQKPVSVR-----VLFALALMLVWFLESTPCGHNACLKCFLKWMGQGHRSC 193

  Fly   259 FTC-----------PHLRPAFLLDAMLARVGE--DVKDGMLAHVGVPEVVETEDHLQAIRWQIHS 310
            .||           |.:..:.:....||||.|  |.:...:.|     .|:.||.          
  Fly   194 GTCRSVIPESMVTNPRINLSIVSAIRLARVSEKADARTSKVVH-----YVDNEDR---------- 243

  Fly   311 NYLPQVKLYELYQCDVDKYVSRFNDECSKRSPSRAQDIPEGDIKLRMDPEH-RRLGAEIDFERAM 374
                           .||   .|..|.:|::.:  .:...|.|.:.:..:| ..:.||.|..|..
  Fly   244 ---------------PDK---AFTTERAKKTGN--ANASSGKIFVTIPRDHFGPIPAENDPVRNQ 288

  Fly   375 SIYNVFRQDCFDEDSRKRKCTEVFRARLQFLNEEVRREIQEHLDYAIDNCLAGTRYERVQGDGPQ 439
            .:.                ..|.::.||      ..|:...|.                    |.
  Fly   289 GLL----------------VGESWKGRL------ACRQWGAHF--------------------PH 311

  Fly   440 VKGISVKYPLFMKYFTHYGTQGKSL----KDIES----MMYGGAGKLFMAHNGWVMNGDPLKDFA 496
            |.||:.:        ..||.|...|    .|.|.    .:|.|:|       |.::.|:...:..
  Fly   312 VSGIAGQ--------ASYGAQSVVLAGGYDDDEDHGEWFLYTGSG-------GRILKGNKRTNTV 361

  Fly   497 RAQPGTGNVYLR-----RELIAWGDSVKLRYGDKPEDSPY-----LWKHMQEY-VDTTARI---- 546
            :|   ...|:|.     |.....|..|::....|.:.|||     |.::...| ::...||    
  Fly   362 QA---FDQVFLNFNEALRLSCKLGYPVRVVRSTKDKRSPYAPQGGLLRYDGVYRIEKCWRIVGIQ 423

  Fly   547 -------FDGVRLDNCHSTPLHVAEYLLDSARKVN--PELYVAAELFTNSDHTDNIFVNRLGITS 602
                   |..||.|| ...|....|: .|..|.:.  |||.:|.:||.                 
  Fly   424 GTHKMCRFLFVRCDN-EPAPWTSDEH-GDRPRPLPNVPELNMATDLFE----------------- 469

  Fly   603 LIREALSAWDSHEQGRLVYRYGGAPVGAFFPCPKR----ILAPGIAHALFMDLTHDNPSPVEKR 662
              |:...:|| .::|...:|:...|     |..|:    :|.|.....|...:...||:.:..|
  Fly   470 --RKESPSWD-FDEGEDRWRWMKPP-----PASKKAVKNVLDPEERKLLREAIKSANPNTMRAR 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 3/19 (16%)
C2H2 Zn finger 518..538 CDD:275368 6/24 (25%)
C2H2 Zn finger 545..565 CDD:275368 8/30 (27%)
C2H2 Zn finger 575..596 CDD:275371 6/20 (30%)
C2H2 Zn finger 754..775 CDD:275368
C2H2 Zn finger 780..801 CDD:275368
C2H2 Zn finger 809..829 CDD:275368
SUF4-like 852..>891 CDD:411020
C2H2 Zn finger 864..885 CDD:411020
C2H2 Zn finger 864..885 CDD:275368
C2H2 Zn finger 891..917 CDD:275368
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 15/75 (20%)
C2H2 Zn finger 228..248 CDD:275368 7/52 (13%)
SFP1 <243..310 CDD:227516 17/138 (12%)
C2H2 Zn finger 256..313 CDD:275368 13/100 (13%)
SFP1 <287..376 CDD:227516 23/148 (16%)
C2H2 Zn finger 289..314 CDD:275368 7/66 (11%)
C2H2 Zn finger 325..345 CDD:275368 3/19 (16%)
C2H2 Zn finger 355..376 CDD:275368 3/23 (13%)
C2H2 Zn finger 385..405 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.