DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG30020

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:1154 Identity:195/1154 - (16%)
Similarity:317/1154 - (27%) Gaps:494/1154 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IELGLQSLLSRHY-----------------QLEVSPDP-------------------------QK 53
            :.:.||:|||.|.                 |:.:.|.|                         :.
  Fly   320 VNVSLQNLLSSHNDPMDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKS 384

  Fly    54 QQL--------LCEVCVTNLIRLFDI--------DELEREREAAKDAAQGKDSKA---------- 92
            .||        .|:.|....:|..|:        ..::...:..|:.|||.:|:.          
  Fly   385 HQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFET 449

  Fly    93 -----------EEDPIIITEVQATPP-AAKP-------AKKTVPSRPLTKVLRPVPIIPTREPSA 138
                       |...:..||||..|. ..:|       ||:..|::.|.....|:.|   :.|..
  Fly   450 STVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGI---KYPPG 511

  Fly   139 RIRNRAAAASNVT----PDTSRSPEPPETPSTE-------DAVSKSEPKLVSKVADQEHFSVLIQ 192
            .:..:|.....|.    ||..:..||..|.||.       :.|..:.|...:..::    |:|:.
  Fly   512 VLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSN----SLLVT 572

  Fly   193 NILDEEEAVVEDETAVKEES---------------SEAVQVTEETEAPGQIVILNSEAV------ 236
            |  ......||:.|......               :||||     :||.     ||.:|      
  Fly   573 N--PAPVTTVEETTGTASNHAFGIFPEISEGNLPVNEAVQ-----QAPA-----NSSSVSVFGDM 625

  Fly   237 ------TD-----TNPDENVYIYEHEDVMDPNLDNVKVKPISCSSRLVAQAEESQSD-------- 282
                  ||     |.|.:.:.:.:.:|::   :||..:.....:..|....||.:.|        
  Fly   626 QDFIDNTDVAAICTIPADGMPVVDGDDIV---IDNNNISLDFDAENLFEDFEEEEDDTVADEEDE 687

  Fly   283 -DDIDEGETSNVVL-FNFVDIKEKDEVDNIPEYLATVVKTSFEKLTFQWCTVCKHCSLKCPTFES 345
             |:.||.:.::... .|.:...:.|:||:..:..:                              
  Fly   688 ADNEDENDNNDAATDQNLLLTSDDDDVDDFDDEQS------------------------------ 722

  Fly   346 LFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFSNILQ 410
              .||.|.:                                           |..|...|::..:
  Fly   723 --KHLQKPY-------------------------------------------CIYCNKKFTSQYK 742

  Fly   411 YNKHSCAHVIKKKRGFRSY-CEMCSLEFPSWKRFNFHSQFHLEKHRPRACFV------CDYATTN 468
            :..|...|     ||...| ||:|: ...:.||........:.|..|....|      ...|.||
  Fly   743 FENHMFVH-----RGLAPYRCELCT-NLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTN 801

  Fly   469 IDELFQHLNYSHEPVGTLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNG 533
            |::|:.                                  ..:.:....|::|....||...:..
  Fly   802 IEKLYP----------------------------------GRIKNPMLMCAKCPFECESDSEMRK 832

  Fly   534 HMRAMHG-----------------SVISCELCSREFATEATYNIHMKK-HL---IIEKDVHVC-- 575
            |:.|.||                 ....|..|.|.||.:.|.:.|::: ||   |||.....|  
  Fly   833 HLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGE 897

  Fly   576 STCGLLSDSRETLLAHVNSV------------------KTACFGS-------------------- 602
            :....::.|..|:...||||                  .|...|:                    
  Fly   898 AITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPA 962

  Fly   603 ----------------------------------------------------------KIDVELL 609
                                                                      ..|.:::
  Fly   963 VPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIM 1027

  Fly   610 RD--------------------AYVCEYCSSY-------FKEKDCLQAHRDSGVHKDGVFLCQPC 647
            ||                    :..|....||       .:.........:|.:|:..:.:|:.|
  Fly  1028 RDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLC 1092

  Fly   648 GKEFPHM-KLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHESAS 711
            .:.|..: ||.:|.:    :|.|::...|                    |.  |.||        
  Fly  1093 NQTFDELGKLVKHEM----ELHSNTERSR--------------------WG--YQHK-------- 1123

  Fly   712 KQAEKSSKSAQEWVCQFCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSYKSHDALAKHHAYWHE 776
                          |..|....|:...|..|:.| |:|....|.||..|:.:...|.:|....|.
  Fly  1124 --------------CAICNTSYRTLTLLKFHMKR-HSNRKSQCKLCPKSFVTIAELERHTKAKHS 1173

  Fly   777 PIECPECF-----KIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLH-GQ-SYS 834
            ..:...||     |....:.:...|....|.: .||.|.||.|.......::.|..:| |: :|.
  Fly  1174 KDKTLRCFMDGCRKTFAFKHHLIRHQKASHLS-TRYICPVCNKEEKSNVHLKNHMSVHKGEITYK 1237

  Fly   835 CEQCSFTTRNKKSLSVHVLGQHYKRFAFECNVCKKRFGRSQGLKTHMQR 883
            |.:|..:...:..|..|.|..|..||..|      ..|....|.|:..|
  Fly  1238 CPKCDRSYLRRGRLVTHALIIHDLRFTTE------ELGNLSSLATNQAR 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 0/19 (0%)
C2H2 Zn finger 518..538 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 7/20 (35%)
C2H2 Zn finger 575..596 CDD:275371 7/40 (18%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 4/25 (16%)
C2H2 Zn finger 809..829 CDD:275368 5/19 (26%)
SUF4-like 852..>891 CDD:411020 9/32 (28%)
C2H2 Zn finger 864..885 CDD:411020 4/20 (20%)
C2H2 Zn finger 864..885 CDD:275368 4/20 (20%)
C2H2 Zn finger 891..917 CDD:275368
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368 2/19 (11%)
C2H2 Zn finger 397..418 CDD:275368 4/20 (20%)
C2H2 Zn finger 442..460 CDD:275368 0/17 (0%)
C2H2 Zn finger 730..750 CDD:275368 4/19 (21%)
C2H2 Zn finger 758..777 CDD:275368 5/19 (26%)
C2H2 Zn finger 1089..1110 CDD:275368 6/24 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 6/20 (30%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 4/22 (18%)
C2H2 Zn finger 1210..1230 CDD:275368 5/19 (26%)
C2H2 Zn finger 1238..1254 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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