Protein Alignment CG18011 and CG1602

DIOPT Version :10

• Sequence 1: NP_610559.1
• Gene: CG18011 / 36068
• FlyBaseID: FBgn0033491
• Length: 985
• Species: Drosophila melanogaster
• Sequence 2: NP_610291.2
• Gene: CG1602 / 35684
• FlyBaseID: FBgn0033186
• Length: 577
• Species: Drosophila melanogaster
• Alignment Length: 624
• Identity: 123/624 - (19%)
• Similarity: 185/624 - (29%)
• Gaps: 251/624 - (40%)

  Fly   428 SYCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCD 492
            |||. ..:|...|:.|..|.:                   |:....:.:....||||.   :..:
  Fly    21 SYCP-TDVEVAQWQEFVLHIR-------------------NVHSKVRSMEDDFEPVGE---NSTE 62

  Fly   493 RTFRDP---------SVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCE-- 546
            ....||         |:|.:.       .|...:|.:.            |:.|:..|....|
  Fly    63 SGHVDPPEEKPQAEESIFQQD-------ESADGACVQL------------HIDAVRSSTNETEES 108

  Fly   547 ---------------------LCSREFATEATYNIHMK---------KHLIIEKDVHVCSTCGLL 581
                                 |......|..||..|..         |.:.|.|: |.|......
  Fly   109 DVSLVTDEEESVQDEDPSEPALDDANLKTTPTYKFHPSFFRRDHRTIKFIEIYKE-HPCLWNPAH 172

  Fly   582 SDSRETLLAHVNSVKTACFGSKIDVELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHKDGVFLCQP 646
            ||.:|.     ...|.|.....||:|.....::.|.......:|..:|.:.   |||..|
  Fly   173 SDYKEP-----KKCKEALKRMAIDLEATVSVFLNEMALKLAIKKVHMQFNT---VHKRVV----- 224

  Fly   647 CGKEFPHMKLYRHHLRNYQQLRSDSTHRRLEICVYYMC-------DQENCT-------------- 690
            .||:.|                     :.|...:|.:|       |:|..|
  Fly   225 SGKQKP---------------------QSLAFSIYKLCCFLNASNDEEGATNNEKIKLDFSKKNK 268

  Fly   691 ------ESYVNWNSLY--THKRRTHESASKQAEKSS--------------------KSAQEW--- 724
                  |.|.|:..||  .||..::.|:.|||.:|.                    ::.::|
  Fly   269 LTTDLIEMYANFPQLYDSNHKEFSNMSSRKQAYESMAAEISVPNVDINSDDIFRAIQNLRQWYYK 333

  Fly   725 --------------------------------VCQFCLKECRSKMSLSVHVARSHNNDNV--TCP 755
                                            ||:||.:...|...|..|:.::||...:  .|.
  Fly   334 NTKHAIYAGSTAEKFYLEVCRFMPAKMYKQRLVCEFCHQITSSDHVLQSHIFKAHNIGELPFKCT 398

  Fly   756 LCNSSYKSHDALAKH-------------------------------HAYWHEPIECPECFKIVKN 789
            ||:.|:.....||.|                               |. .|:|..|..|.|..:.
  Fly   399 LCDRSFVGRCELANHIQRVHIGKTHKCTHCERSFAVMSDLQLHIRTHT-GHKPYVCEHCGKAFRL 462

  Fly   790 RRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQK--LHGQSYSCEQCSFTTRNKKSLSVHV 852
            |.....||..:|:..:.:.|::|.|.|..|.::..|.|  |:.:...|..|     .|...|.|.
  Fly   463 RSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDKICSVC-----GKGFTSCHA 522

  Fly   853 LGQH------YKRFAFECNVCKKRFGRSQGLKTHMQRAH 885
            |.:|      .|:|.  |.:|..||.:..||.|||:|.|
  Fly   523 LIRHRQIHSEVKKFV--CKLCDSRFSQFVGLNTHMKRTH 559

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18011	NP_610559.1	C2H2 Zn finger	488..508	CDD:275368	4/28 (14%)
		C2H2 Zn finger	518..538	CDD:275368	2/19 (11%)
		C2H2 Zn finger	545..565	CDD:275368	6/51 (12%)
		C2H2 Zn finger	575..596	CDD:275371	4/20 (20%)
		C2H2 Zn finger	754..775	CDD:275368	8/51 (16%)
		C2H2 Zn finger	780..801	CDD:275368	6/20 (30%)
		C2H2 Zn finger	809..829	CDD:275368	7/21 (33%)
		SUF4-like	852..>891	CDD:411020	15/40 (38%)
		C2H2 Zn finger	864..885	CDD:411020	10/20 (50%)
		C2H2 Zn finger	864..885	CDD:275368	10/20 (50%)
		C2H2 Zn finger	891..917	CDD:275368
CG1602	NP_610291.2	MADF_DNA_bdg	157..244	CDD:463144	25/121 (21%)
		MADF_DNA_bdg	273..356	CDD:463144	13/82 (16%)
		C2H2 Zn finger	367..388	CDD:275368	6/20 (30%)
		C2H2 Zn finger	397..418	CDD:275368	7/20 (35%)
		C2H2 Zn finger	425..445	CDD:275368	0/19 (0%)
		zf-H2C2_2	437..460	CDD:463886	6/23 (26%)
		C2H2 Zn finger	453..470	CDD:275368	4/16 (25%)
		C2H2 Zn finger	482..502	CDD:275368	7/19 (37%)
		C2H2 Zn finger	510..530	CDD:275368	7/24 (29%)
		C2H2 Zn finger	538..559	CDD:275368	10/20 (50%)