DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and zf30C

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:63 Identity:18/63 - (28%)
Similarity:28/63 - (44%) Gaps:10/63 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1381 LAAPELADPKHAWRALENAKKYLLGPL-----GMKTLDYEDWGYR---GNYDNSIDSDDKTVA 1435
            :|..|:.|||....  |:.|...:.||     .:|.:..:|.|::   |.|.:.....||.||
  Fly     1 MADDEVVDPKKYLE--ESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVA 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 575..596 CDD:275371
C2H2 Zn finger 754..775 CDD:275368
C2H2 Zn finger 780..801 CDD:275368
C2H2 Zn finger 809..829 CDD:275368
SUF4-like 852..>891 CDD:411020
C2H2 Zn finger 864..885 CDD:411020
C2H2 Zn finger 864..885 CDD:275368
C2H2 Zn finger 891..917 CDD:275368
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/19 (26%)
C2H2 Zn finger 61..82 CDD:275368 1/1 (100%)
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 603..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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