DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG18262

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:508 Identity:115/508 - (22%)
Similarity:183/508 - (36%) Gaps:137/508 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 SSTTYSCSECMANFESRGRLNG---HMRAMHGSVISCELCSREF--------ATEATYNIHMKKH 565
            :|...||..|    :.|..|:|   |.|..|.:..|..|||.|.        ..|...|..:.:.
  Fly    28 ASYEVSCLLC----DQRLPLDGYPEHFRLKHFTNSSSSLCSNELESDPIAQDVVEVQGNEELHEE 88

  Fly   566 LIIE----------------KDVHVCSTCGL---LSDSRETLLAHVNSVKTACFGSKIDVELLRD 611
            |..|                |..|......:   |.::||.||               |:||   
  Fly    89 LAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLL---------------DIEL--- 135

  Fly   612 AYVCEYCSSYFKEKDCLQAH------------RDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNY 664
                ::......|.:  :.|            :||...||.:|.|..|.             |.|
  Fly   136 ----DWTGGEQSEHN--ETHEEEEGESDDDDTKDSNDTKDMLFQCDQCD-------------RAY 181

  Fly   665 QQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHESASKQAEKSSKSAQE-WVC-- 726
            ...||..:||||:             .|..|..||       .:|||::..|..|...: :.|  
  Fly   182 NTKRSLQSHRRLK-------------HSEANGGSL-------DKSASERNSKKRKGPPKVYKCNE 226

  Fly   727 QFCLKECRSKMSLSVHVARSH--NNDNVTCPLCNSSYKSHDALAKHHAYWH---EPIECPECFKI 786
            :.|.:..|::..|     |.|  .:..:.|.:|...:.....:.:|... |   :|.:||||...
  Fly   227 EACNQTFRTERDL-----RGHRWKHTGIFCDICGKPFTQSGNMMRHRQR-HSGIKPHKCPECDAT 285

  Fly   787 VKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLH--GQSYSCEQCSFTTRNKKSLS 849
            ...::...:| ::.|:.:....|.||.:....:..:.||.:.|  .:...||.|.....:...|:
  Fly   286 FYTQKELSSH-SICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLN 349

  Fly   850 VHVLGQHYKRFAFECNVCKKRFGRSQGLKTHMQRAHGD--KYTCRDYFDGGCGRTFVNSSQLNVH 912
            ||.: .|.....|.|:||...|.|.:.|:.| :..|.:  ||.|:     .||:||..|..||.|
  Fly   350 VHAV-SHTNLRPFVCDVCGSTFQRKKALRVH-KLLHSEQRKYACK-----LCGKTFAQSGGLNAH 407

  Fly   913 VRKIHD-----GII--LLQEDVVEEDEYITDDAPSTSKKRRLNENNEFIEEAD 958
            :|. ||     |.:  |.|...:|..|..:....:.:....||...:.:::.:
  Fly   408 MRS-HDPARVKGAVKPLPQSVTIEVIEGKSPPTTTITMAIDLNVEEQLVKQTE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 518..538 CDD:275368 7/22 (32%)
C2H2 Zn finger 545..565 CDD:275368 6/27 (22%)
C2H2 Zn finger 575..596 CDD:275371 5/23 (22%)
C2H2 Zn finger 754..775 CDD:275368 3/20 (15%)
C2H2 Zn finger 780..801 CDD:275368 5/20 (25%)
C2H2 Zn finger 809..829 CDD:275368 5/19 (26%)
SUF4-like 852..>891 CDD:411020 12/40 (30%)
C2H2 Zn finger 864..885 CDD:411020 7/20 (35%)
C2H2 Zn finger 864..885 CDD:275368 7/20 (35%)
C2H2 Zn finger 891..917 CDD:275368 10/25 (40%)
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 20/97 (21%)
C2H2 Zn finger 224..246 CDD:275368 6/26 (23%)
C2H2 Zn finger 251..271 CDD:275368 3/20 (15%)
zf-H2C2_2 263..288 CDD:463886 7/25 (28%)
C2H2 Zn finger 279..327 CDD:275368 11/48 (23%)
zf-H2C2_2 320..342 CDD:463886 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 6/20 (30%)
C2H2 Zn finger 363..383 CDD:275368 7/20 (35%)
zf-C2H2 389..411 CDD:395048 11/27 (41%)
C2H2 Zn finger 391..411 CDD:275368 10/25 (40%)
Blue background indicates that the domain is not in the aligned region.

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