DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG3032

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_572376.1 Gene:CG3032 / 31648 FlyBaseID:FBgn0029928 Length:431 Species:Drosophila melanogaster


Alignment Length:516 Identity:113/516 - (21%)
Similarity:173/516 - (33%) Gaps:147/516 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 MDPNLDNVKVKPISCSSRLVAQAE----ESQSDDDIDEGETSNVVLFNFVDIKEKDEVDNIPEYL 314
            |..||....|:.:.|:..|..:.|    |.|||:.....|...::..|.....|..:.|.     
  Fly     1 MPLNLTRESVRELCCTCLLQLEKEPLKTELQSDEIPISQELQQLLNINLSQDVENQDADQ----- 60

  Fly   315 ATVVKTSFEKLTFQWC--TVCKHCSLKCPTFESLFSHLSKAHKSRRDVYECP---IEGCNKELKG 374
                         ||.  .:|..|......||          |.||...||.   :|...|:.:.
  Fly    61 -------------QWLPNELCLECRSAVQNFE----------KFRRKADECRKQLLEMLKKDPRE 102

  Fly   375 RKFLAMH------LVLLHA-----------PVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKK 422
            ..|..::      ...||.           |:.| |...|....:.:|                 
  Fly   103 PTFEVVYDGREEDQESLHGLEPPEPAPDPDPIDE-PAIKSDKSPRKSF----------------- 149

  Fly   423 KRGFRS--YCEMCSLEFPSWKRFNFHSQFHLEKH---------RPRACFVCDYATTNIDELFQHL 476
             ||.|:  .|.:|        |.:|..|..|..|         ||..|..|:.|.:.:..|:.|:
  Fly   150 -RGSRNTLKCSVC--------RRSFAHQITLAAHIRKVHEGSKRPFQCDQCEKAYSFMGGLYTHI 205

  Fly   477 NYSHEPVGTLF-CDL--CDRTFRDPSVFMEHNK-SHA---NVSSTTYSCSECMANFESRGRLNGH 534
            ...|.|..... ||.  |:|.:.......:|.: .|:   ..:...:.|.:|.|:|.....|..|
  Fly   206 REVHAPKERRHPCDQPGCERIYTSRIAMQKHKRLKHSPRDRDALKKFICEQCGASFNQSANLKYH 270

  Fly   535 MRAMH-------------GSVISCELCSREFATEATYNIH-MKKHLIIEKDVHVCSTCGLLSDSR 585
            ::..|             |....|::|.:||.:..|...| :::|.:.|:..|.|..||.....:
  Fly   271 LKTKHPTEDEVAAREGGAGERHFCDICQKEFHSRYTLKYHTLQQHEVQEELPHECQVCGRRMAKK 335

  Fly   586 ETLLAHVNSVKTACFGSKIDVELL--RDAYVCEYCSSYFKEKDCLQAHRDSGVH-KDGVFLCQPC 647
            ..||.|:               |:  .|...||:|...|..:..|:|| ...|| |...|.|..|
  Fly   336 FMLLQHM---------------LMHSNDKLPCEHCGRRFARRFELEAH-VRAVHLKLKPFPCHHC 384

  Fly   648 GKEFPHMKLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHE 708
            .:.|...|..|||    :.:.:....        |:||  .|.:::.....|..| |:.||
  Fly   385 PESFASRKTLRHH----EYIHTGEKP--------YICD--TCGQAFRQQTCLKNH-RKVHE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 5/22 (23%)
C2H2 Zn finger 518..538 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 6/20 (30%)
C2H2 Zn finger 575..596 CDD:275371 6/20 (30%)
C2H2 Zn finger 754..775 CDD:275368
C2H2 Zn finger 780..801 CDD:275368
C2H2 Zn finger 809..829 CDD:275368
SUF4-like 852..>891 CDD:411020
C2H2 Zn finger 864..885 CDD:411020
C2H2 Zn finger 864..885 CDD:275368
C2H2 Zn finger 891..917 CDD:275368
CG3032NP_572376.1 zf-AD 13..95 CDD:462262 22/109 (20%)
C2H2 Zn finger 158..179 CDD:275368 7/28 (25%)
C2H2 Zn finger 188..209 CDD:275368 5/20 (25%)
SFP1 <213..275 CDD:227516 12/61 (20%)
C2H2 Zn finger 218..239 CDD:275368 5/20 (25%)
C2H2 Zn finger 254..275 CDD:275368 6/20 (30%)
C2H2 Zn finger 294..315 CDD:275368 6/20 (30%)
C2H2 Zn finger 325..345 CDD:275368 7/34 (21%)
C2H2 Zn finger 352..373 CDD:275368 7/21 (33%)
C2H2 Zn finger 381..401 CDD:275368 7/23 (30%)
C2H2 Zn finger 409..429 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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