DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and Zfp668

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_017444703.1 Gene:Zfp668 / 309002 RGDID:1308623 Length:645 Species:Rattus norvegicus


Alignment Length:641 Identity:129/641 - (20%)
Similarity:202/641 - (31%) Gaps:212/641 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 KKRGFRSYCEMCSLEFPSWKRFNFHSQFH---------------------------------LEK 453
            |:.|.|..|..|:..||:..|...|:..|                                 :.|
  Rat    42 KRSGRRYKCLFCTKTFPNAPRAARHAATHTTTDCTEEVNEVQPKVDAEPKAEEASGDKVSGSVAK 106

  Fly   454 HRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSC 518
            .||.||.:|..|.....||..| ..||.......|..|.|.|..|.....|..|||  ....:.|
  Rat   107 PRPYACPLCPKAYKTAPELRSH-GRSHTGEKPFPCPECGRRFMQPVCLRVHLASHA--GELPFRC 168

  Fly   519 SECMANFESRGRLNGHMRAMHGS-VISCELCSREFATEATYNIHMKKHLIIEKDVHVCSTCGL-- 580
            :.|...:.:..:|..|.|...|. ..:|..|.:.||..:.:..|.:.|..:..  :.|..||.  
  Rat   169 THCPKAYGTLSKLKIHQRGHTGERPYACTDCGKSFADPSVFRKHRRTHAGLRP--YSCERCGKAY 231

  Fly   581 --LSDSRETLLAHVNSVKTACFGSKIDVELLRDAYVCEYCSSYFKEKDCLQAHRDSGVH-KDGVF 642
              |.|.|....:|.        |.:        .::|..|...|.....|..|:  .:| ....:
  Rat   232 AELKDLRNHERSHT--------GER--------PFLCSECGKSFSRSSSLTCHQ--RIHAAQKPY 278

  Fly   643 LCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTH 707
            .|..|||.|..:..|:.|.|.:...:.            ::|.:  |...:.:.:|...| :|.|
  Rat   279 RCPACGKGFTQLSSYQSHERTHSGEKP------------FLCPR--CGRMFSDPSSFRRH-QRAH 328

  Fly   708 ESASKQAEKSSKSAQEWVCQFCLKECRSKMSLSVHVARSHNNDN-VTCPLCNSSYKSHDALAKHH 771
            |           ..:.:.|:.|.|:.|....|::| .|.|..|. ..|..|:.::.:...| |.|
  Rat   329 E-----------GVKPYRCEKCGKDFRQPADLAMH-RRVHTGDRPFKCLQCDKTFVASWDL-KRH 380

  Fly   772 AYWH---EPIECPECFKIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLH---- 829
            |..|   .|..|.||.:....|.:...| :.:||.::.:.|:.|.|.|...|.:..|::.|    
  Rat   381 ALVHSGQRPFRCEECGRAFAERASLTKH-SRMHSGERPFHCNACGKSFVVLSSLRKHERTHRSNE 444

  Fly   830 ----------------------------------------------------------------- 829
                                                                             
  Rat   445 TTGAAPQQELVLGLALPVGVVGEGSAAPVAGAGIGDAPAGLLGLPPESGSVVATQWQVVGMTVEH 509

  Fly   830 --------GQS---------------------YSCEQC--SFTT-----RNKKSLSVHVLGQHYK 858
                    |::                     :.|.:|  :|:|     |:::|        |.:
  Rat   510 VECQDAGVGEAPSTLGDAGEVGGEETDEKPPQFVCRECKETFSTLTLLRRHERS--------HPE 566

  Fly   859 RFAFECNVCKKRFGRSQGLKTHMQRAHGDKYTCRDYFDGGCGRTFVNSSQLNVHVR 914
            ...|.|..|.|.|....||:.| .|.|.   :.|.|....|.:.|:::|.|..|.|
  Rat   567 LRPFPCTQCGKSFSDRAGLRKH-SRTHS---SVRPYSCSQCPKAFLSASDLRKHER 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..596 CDD:275371 7/24 (29%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 5/20 (25%)
C2H2 Zn finger 809..829 CDD:275368 6/19 (32%)
SUF4-like 852..>891 CDD:411020 11/38 (29%)
C2H2 Zn finger 864..885 CDD:411020 8/20 (40%)
C2H2 Zn finger 864..885 CDD:275368 8/20 (40%)
C2H2 Zn finger 891..917 CDD:275368 8/24 (33%)
Zfp668XP_017444703.1 C2H2 Zn finger 50..70 CDD:275368 6/19 (32%)
COG5048 91..445 CDD:227381 93/405 (23%)
C2H2 Zn finger 112..132 CDD:275368 6/20 (30%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
C2H2 Zn finger 168..188 CDD:275368 5/19 (26%)
C2H2 Zn finger 196..216 CDD:275368 5/19 (26%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 5/21 (24%)
COG5048 274..624 CDD:227381 72/386 (19%)
C2H2 Zn finger 280..300 CDD:275368 8/19 (42%)
C2H2 Zn finger 308..328 CDD:275368 5/22 (23%)
C2H2 Zn finger 336..356 CDD:275368 7/20 (35%)
C2H2 Zn finger 364..384 CDD:275368 6/20 (30%)
C2H2 Zn finger 392..412 CDD:275368 5/20 (25%)
C2H2 Zn finger 420..440 CDD:275368 6/19 (32%)
C2H2 Zn finger 544..564 CDD:275368 6/27 (22%)
C2H2 Zn finger 572..592 CDD:275368 8/20 (40%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)

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