DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and mld

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster


Alignment Length:1176 Identity:194/1176 - (16%)
Similarity:362/1176 - (30%) Gaps:447/1176 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SCLHCSVFSTKYQYQEIFDEFGIELGLQSLLSRHYQLEVSPDPQKQQLLCEVCVTNLIRLFDIDE 73
            :|.|...|.|...|             .:|..:...:...|:|.:|                   
  Fly   866 NCAHIDEFLTPADY-------------ATLTEQESSVSSPPNPFEQ------------------- 898

  Fly    74 LEREREAAKDAAQGKDSK--AEEDP---------------------------------IIITEV- 102
                    ...|:.||.|  |.|||                                 :.:|:. 
  Fly   899 --------SSVAEPKDEKPSATEDPFDNSNFTNELIGFQNDIPCFENIETPEEGQNLHLELTQFL 955

  Fly   103 ------QATPPAAKPAKK-TVPSRPLTKVLRPVPIIPTREPSARIRNRAAAASNVTPDTSRSPEP 160
                  |:.|||.:..:| .:.::|.|..:.....:|.:....:.:|.:|   |.:|..|    |
  Fly   956 RDLQPSQSDPPAGEQVEKIEMETQPSTVQMDVQSNLPVQAADTQPQNESA---NHSPFES----P 1013

  Fly   161 PETPSTEDAVS-KSEPKLVSKVADQ-----EHFSVLIQNILDEEEAVVEDETAVKEESSEAVQVT 219
            ..:|..:..:. :.||::.:::..|     :|..:.:|:..:.:..|..     .::|....|:.
  Fly  1014 ISSPQVQSQIELQMEPQIETQMQPQIETRMQHDVLSVQSPQNHQPQVQS-----HDQSQMQHQIP 1073

  Fly   220 EETEAPGQIVILNSEAVTDTNPDENVYIYEHEDVMDPNLDNVKVKPISCSSRLV--AQAEESQSD 282
            .:.|.  ||.:.|.|              ::...:.|...:..|..:...|:||  .|.:.:.:.
  Fly  1074 PQIEP--QIEVQNQE--------------QNTLQLVPQAQHQVVPHVQLQSQLVPHVQTQGTTTT 1122

  Fly   283 DDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLATVVK-----TSFEKLTFQWCTVCKHCSLKCPT 342
            ...::....::|.........|.:|.::|...:...:     .|.::...||.:|....::|...
  Fly  1123 VTYEQIYQQHIVQQTVQQSSNKMQVISLPSAGSETTRQWQTQQSQQQQQVQWSSVGGLEAIKSAP 1187

  Fly   343 FESLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFSN 407
            .||:....:..:.|..|:|                                     |:...|::.
  Fly  1188 VESVAPTTTTYYISASDLY-------------------------------------PQQTETYTM 1215

  Fly   408 ILQYNKHSCAHVIKKKRGFRSYCEMCSLEFPSWKRFNFHSQFHLEKHRPRAC------------- 459
            :...:..|  :||::....:.:|:         ::.....|.|..:|:.:..             
  Fly  1216 LQPASNES--YVIEQVNHQQQHCQ---------QQIQMSQQQHQRQHQQQQAQQQQQPIMILIQQ 1269

  Fly   460 ------------------FVCDYATTN------------IDELFQHLNY-------------SHE 481
                              .:.:.||:|            |.:.:||..|             ||.
  Fly  1270 PEIQQPVASASNPQQAPLHIYNAATSNDVHQMQHTQRQQIRQQYQHQQYQRLQQPQQTRVVQSHP 1334

  Fly   482 PVG------------------------TLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECM 522
            .:|                        ||.|..|            ||....: ||..||     
  Fly  1335 VLGMPGATSISTKVTPIPVTAARGRPLTLKCRFC------------HNGPRFS-SSLEYS----- 1381

  Fly   523 ANFESRGRLNGHMRAMHGSV--ISCELCSREFATEATYNIHMKKHLIIEKDVHVCSTCGLLSDSR 585
                      .|:..:|.:|  .:|..|...||.....:.|:..|.::::  :.|..|..:..::
  Fly  1382 ----------RHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVVQQ--YQCGQCSHVFPAQ 1434

  Fly   586 ETLLAHVN----SVKTACFGS-KI-DVELLRDAYVCEYCSSY------FKEKDCLQAHRDSGVHK 638
            :.|..|:.    ::||...|: |: ||:|       :..|..      :|.:..||.|:.....|
  Fly  1435 KALDVHIQRFHMTLKTDPSGAVKVEDVQL-------QITSERRPRGRPYKPRLQLQQHQLQPQQK 1492

  Fly   639 DGVFLCQPCGKEFPHMKLYRHH------------LRNYQQLR----------------------- 668
            ..|...|...|....:...:||            |:..|||:                       
  Fly  1493 LQVQQHQQQQKALQQLPQAQHHQQQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQQQ 1557

  Fly   669 -----------------SDSTHRRLEICVYYMCDQENCTESYVNWNSLY---------------- 700
                             |.:|.|::..|.    |.|:||..:.:.|..:                
  Fly  1558 PLMQPQSPHPSTVEMQASPTTPRKILCCP----DCEDCTSGHSHANEQFEELQTLQAPPTVLTPP 1618

  Fly   701 ------------THKRRTHESASKQAEKSSKSAQEWVCQFCLKECRSK---------MSLSVHVA 744
                        .:.:.....:.:|:|..|.:.        |::.|.:         :.|:..||
  Fly  1619 STIVSVPSPQPMVYSQHITMPSPEQSEPDSTTT--------LRQYRKRGVIVGPQGPLHLATPVA 1675

  Fly   745 --------RSHNNDNV--------------TCPLCNSSYKSHDALAKHHAYWHEPIECPECFKIV 787
                    .|...|::              ..|...|:.:..:....||..:     |.|.|   
  Fly  1676 SPSPSSSPSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLY-----CEERF--- 1732

  Fly   788 KNRRNYDTHVNVVHS--NKKRYSCSVCQKGFYHKSEMEAHQKLH---GQSYSCEQCSFTTRNKKS 847
            .|..:...|..:.|.  ....|.|::|::|:..::.:..|.:.|   |:.|.|..|.........
  Fly  1733 TNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQ 1797

  Fly   848 LSVHVLGQHYKRFAFECNVCKKRFGRSQGLKTHMQRAHGD-KYTCRDYFDGGCGRTFVNSSQLNV 911
            |::|.:..|.......|:.|.|:||....||||: :.||: .|.|     .||.|||....:|..
  Fly  1798 LTLHKITVHLLSKPHTCDECGKQFGTESALKTHI-KFHGELGYQC-----DGCDRTFEYLKELRK 1856

  Fly   912 HVRKIH 917
            | |:.|
  Fly  1857 H-RRTH 1861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 4/19 (21%)
C2H2 Zn finger 518..538 CDD:275368 1/19 (5%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..596 CDD:275371 4/24 (17%)
C2H2 Zn finger 754..775 CDD:275368 4/20 (20%)
C2H2 Zn finger 780..801 CDD:275368 5/20 (25%)
C2H2 Zn finger 809..829 CDD:275368 4/19 (21%)
SUF4-like 852..>891 CDD:411020 13/39 (33%)
C2H2 Zn finger 864..885 CDD:411020 9/20 (45%)
C2H2 Zn finger 864..885 CDD:275368 9/20 (45%)
C2H2 Zn finger 891..917 CDD:275368 9/25 (36%)
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645 30/177 (17%)
C2H2 Zn finger 1365..1388 CDD:275368 9/50 (18%)
C2H2 Zn finger 1396..1416 CDD:275368 5/19 (26%)
C2H2 Zn finger 1424..1445 CDD:275368 4/20 (20%)
C2H2 Zn finger 1725..1746 CDD:275368 5/28 (18%)
C2H2 Zn finger 1756..1776 CDD:275368 4/19 (21%)
C2H2 Zn finger 1785..1806 CDD:275368 4/20 (20%)
zf-C2H2 1812..1834 CDD:395048 9/22 (41%)
C2H2 Zn finger 1814..1834 CDD:275368 9/20 (45%)
zf-C2H2 1839..1861 CDD:395048 10/27 (37%)
C2H2 Zn finger 1841..1861 CDD:275368 9/25 (36%)
zf-C2H2 1866..1888 CDD:395048
C2H2 Zn finger 1868..1888 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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