DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and C09F5.3

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001367485.1 Gene:C09F5.3 / 182454 WormBaseID:WBGene00015649 Length:378 Species:Caenorhabditis elegans


Alignment Length:487 Identity:93/487 - (19%)
Similarity:172/487 - (35%) Gaps:138/487 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 HSCAHVIKKKRGFRSYCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHLNY 478
            |:.:||.:::|...|:...     |:       |...:::.....|.:|....::|.:|..|...
 Worm    11 HNSSHVKQEERADDSHSNS-----PA-------SSKSIKQENLLKCELCSTVCSSISQLQSHTLS 63

  Fly   479 SHEPVGTLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVI 543
            .|.|.            :.||:    :.|::..|:...:|.:|...||                 
 Worm    64 EHVPE------------KKPSI----STSNSAPSTKRVACQQCEDTFE----------------- 95

  Fly   544 SCELCSREFATEATYNIHMKKHL-IIEKDVHVCSTC--GLLSDSRETLLAHVNSVKTACFGSKID 605
                   :|   |.:.||||.|| .:...:..|..|  |.....:::.|.|:.:       ..:.
 Worm    96 -------DF---AQFAIHMKSHLSSVTSQLFFCPICPVGTPFRDKKSQLEHLTT-------QHLQ 143

  Fly   606 VELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNYQQLRSD 670
            :::.:  ::|..|.|.|........| .:..||.  :.|..|..|..:.|.::.|.:.:.     
 Worm   144 IQVTQ--HICSICDSAFPSPQAQSVH-FAEAHKK--YSCTNCDFETENEKTFKEHSKQHS----- 198

  Fly   671 STHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTHE-------SASKQAEKSSKSA-QEWVCQ 727
               |:|   :.|.|  ..|..||.:...|.||.:.:|:       |.......|.||. ::.|.|
 Worm   199 ---RQL---IMYGC--ALCATSYPSQLHLITHVQMSHDQETFYPPSLPIPTPPSPKSTPKQRVLQ 255

  Fly   728 FCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSYKSHDALAKHHAYWHEPI----ECPECFKIVK 788
                                      |.:|:.|....|.|.:|....|..:    :|.:|.:.:.
 Worm   256 --------------------------CSVCDESVLGEDGLDEHRLRKHCKVRFADKCADCQEPLL 294

  Fly   789 NRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLHGQSYSCEQCSFTTRNKKSLSVHVL 853
            |..::..|. :.||....:.|.||::.....|::.||            |::...::.|.|....
 Worm   295 NETSFVEHC-LRHSKDHAHHCPVCRQSLRSDSQIHAH------------CAYHMSHQDSTSSTSS 346

  Fly   854 GQHYKRFAFECNVCKKR----FGRSQGLKTHM 881
            ......|:|.|.:|.::    |...:..|.|:
 Worm   347 SPITNGFSFVCPICGEKLDDGFALIEHTKIHL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 2/19 (11%)
C2H2 Zn finger 518..538 CDD:275368 4/19 (21%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..596 CDD:275371 5/22 (23%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 4/20 (20%)
C2H2 Zn finger 809..829 CDD:275368 6/19 (32%)
SUF4-like 852..>891 CDD:411020 7/34 (21%)
C2H2 Zn finger 864..885 CDD:411020 5/22 (23%)
C2H2 Zn finger 864..885 CDD:275368 5/22 (23%)
C2H2 Zn finger 891..917 CDD:275368
C09F5.3NP_001367485.1 None
Blue background indicates that the domain is not in the aligned region.

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