DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and LOC1267949

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_061513695.1 Gene:LOC1267949 / 1267949 VectorBaseID:AGAMI1_008463 Length:448 Species:Anopheles gambiae


Alignment Length:466 Identity:104/466 - (22%)
Similarity:163/466 - (34%) Gaps:134/466 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   574 VCSTCGLLSDSRETLLAHVNSVKTACFGSKIDVELLR----------DAYVCEYCSSYFKEKDCL 628
            :|..|..|.:.:..|:|     ||.|  |.:.:|.:|          |...|..|.      :||
Mosquito    11 ICRFCLCLEEKQLLLIA-----KTIC--SSLTIEDVRRCTGIPILPDDVLRCAICF------ECL 62

  Fly   629 QAHRDSG------VHKDGVF--LC---QPCGKEFPHMKLYRHHL---------RNYQQLRSDSTH 673
            .:.:.|.      :..|..|  ||   ...||:.| :||..:.:         ..:..|..:...
Mosquito    63 GSLKKSTDFRYACIRNDATFRRLCVGPSSVGKKEP-VKLGHNPMVHPDADPLELKFNMLIDEVVE 126

  Fly   674 RRL---EICVYYMCDQE-----NCTE-------------SYVNWNSLYTHKRRTHESASK----- 712
            .:|   :..|..:.:|:     :|.|             :|::....::....|.||..|     
Mosquito   127 TKLYDEDTSVQIIANQDASGTVSCEEVAEVEEYNAPYSANYIDLGEPFSDDTDTDESKRKGKPRR 191

  Fly   713 -----------------QAEKSSKSAQE---------------WVCQFCLKECRSKMSLSVHVAR 745
                             ||....:|..:               :||...:      .::..|:| 
Mosquito   192 RKADSYGTRSEATKLPSQAPTIMESESDPSLKPKAPKHKKVLCYVCGIWI------TNIDGHIA- 249

  Fly   746 SHNND-NVTCPLCNSSYKSHDALAKHHAYWHEP---IECPECFKIVKNRRNYDTHVNVVHSNKKR 806
            |||.. |..||.|.....:...|.:|....||.   :.|..|.|...::.||.:|:...|:..:.
Mosquito   250 SHNKQANFACPHCPVKMINKCNLMRHVKQVHEKRIIMYCELCGKGFTHKNNYVSHMRSQHNIGRT 314

  Fly   807 YSCSVCQKGFYHKSEMEAH-QKLH-GQSYSCEQCSFTTRN----KKSLSVHVLGQHYKRFAFECN 865
            |.||||...|.|:..:..| :.:| .:::.|..|....|.    |:...||...|.|     .|.
Mosquito   315 YDCSVCFVKFRHQGALRNHFRSVHLNETFPCATCGMVFRTPERLKRHQPVHSTEQPY-----VCR 374

  Fly   866 VCKKRFGRSQGLKTHMQRAHGDKYTCRDYFDGGCGRTFVNSSQLNVHVRKIH-----DGIILLQE 925
            .|.|||........|.....|..:.||.     |.:::...:|||||:||.|     |....|:.
Mosquito   375 QCPKRFKYRYARTIHEITHTGVIFRCRH-----CDKSYRYKAQLNVHLRKTHPDSESDSTAPLER 434

  Fly   926 DVVEEDEYITD 936
            ...||.|..||
Mosquito   435 ATTEETEQTTD 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 575..596 CDD:275371 5/20 (25%)
C2H2 Zn finger 754..775 CDD:275368 5/20 (25%)
C2H2 Zn finger 780..801 CDD:275368 6/20 (30%)
C2H2 Zn finger 809..829 CDD:275368 7/20 (35%)
SUF4-like 852..>891 CDD:411020 9/38 (24%)
C2H2 Zn finger 864..885 CDD:411020 6/20 (30%)
C2H2 Zn finger 864..885 CDD:275368 6/20 (30%)
C2H2 Zn finger 891..917 CDD:275368 10/25 (40%)
LOC1267949XP_061513695.1 None
Blue background indicates that the domain is not in the aligned region.

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