DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and zgc:171220

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001103300.1 Gene:zgc:171220 / 100126101 ZFINID:ZDB-GENE-071004-11 Length:517 Species:Danio rerio


Alignment Length:678 Identity:158/678 - (23%)
Similarity:248/678 - (36%) Gaps:194/678 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 VKVKPISCSSRLVAQAEESQSDDDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLA---TVVKTSF 322
            :::|...|      :.::.::::.||:.|.:          ::|..:.|.||..:   ..:||. 
Zfish     1 MEIKEEPC------RIKDEETEELIDQTEVN----------EDKQNLFNNPEGFSGENPQIKTE- 48

  Fly   323 EKLTFQWCTVCKHCSLKCPTFESLFSHLSKAHKSRRDV-----YECPIEGCNKELKGRKFLAMHL 382
                                        ..|.|..|.:     :.|  ..|.|..:...:|..|.
Zfish    49 ----------------------------PNAKKQDRTIGAKGSFTC--SECGKVFRIESWLKRHT 83

  Fly   383 VLLHAPVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRSYCEMCSLEFPSWKRFNFHS 447
            :::|.....:    :|..|..:|.|..:.:||..:|.  :.|.|.  |..|...|.|..:.|.|.
Zfish    84 LMVHNGETLL----TCSPCGKSFINEAKLDKHLKSHT--RNRSFT--CTECGKIFKSEDKLNNHV 140

  Fly   448 QFHLEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPSVFMEHNKSHANVS 512
            :.| :|.||.:|.||..:......|.||... :..|..|.||.|.:||...|:...|...|:  .
Zfish   141 RIH-DKERPFSCSVCGKSFKTEHNLSQHQRV-YCDVKPLSCDQCHKTFLSRSLLKLHLVVHS--G 201

  Fly   513 STTYSCSECMANFESRGRLNGHMRAMHGSVIS--CELCSREFATEATYNIHMKKHLIIEKDVHVC 575
            ...|.||.|..:|....|||.|.| .|..|..  |.|..:.|    .|...:|:|.:|...|.  
Zfish   202 ERPYVCSLCGKSFLYLNRLNAHER-NHAEVKPHVCSLRGKSF----LYMNRLKEHELIHSGVR-- 259

  Fly   576 STCGLLSDSRETLLAHVNSVKTACFGSKIDVELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHKD- 639
                                                ::||.:|...|..|..|:.|:  .||.: 
Zfish   260 ------------------------------------SHVCPHCGKSFSTKRNLKKHQ--SVHVEV 286

  Fly   640 GVFLCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKR 704
            ..|.|..|||.|.:.:..::||..:..::|            :.|||  |.:|::..:.|..|. 
Zfish   287 NPFSCTHCGKTFRNKRSVQNHLIAHAGVKS------------FSCDQ--CDKSFIRASYLNRHL- 336

  Fly   705 RTHESASKQAEKSSKSAQEWVCQFC-----LKECRSKMSLSVHVA-RSHNNDNVTCPLCNSSYKS 763
                       |.....:..||..|     :.:|..:..| ||.. |.|     :|..|..|:::
Zfish   337 -----------KVHAGLKPHVCSTCGRSFSILQCLKRHQL-VHTGERPH-----SCSDCGKSFRT 384

  Fly   764 HDALAKHHAYWHEPIECPECFKIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKL 828
            .:.|.||..                           :|:.:|.|||:.|.|.|.....::.||:.
Zfish   385 SNYLRKHQR---------------------------IHTGEKPYSCAQCGKSFRCTKNLKLHQRS 422

  Fly   829 HG--QSYSCEQCSFTTRNKKSLSVHVLGQHYKRFAFECNVCKKRFGRSQGLKTHMQRAH-GDK-Y 889
            |.  :.:||:||..|.....:||.|:......|.   |:.|.:.|..|..|||| ||.| |:| |
Zfish   423 HSGEKPFSCDQCHKTFACPSNLSKHLKAHAAGRV---CSDCGQSFRTSAELKTH-QRIHTGEKPY 483

  Fly   890 TCRDYFDGGCGRTFVNSSQLNVHVRKIH 917
            .|     ..||..:..|..|.:|.| :|
Zfish   484 QC-----SLCGNRYALSGSLKLHER-VH 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 7/19 (37%)
C2H2 Zn finger 518..538 CDD:275368 9/19 (47%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..596 CDD:275371 0/20 (0%)
C2H2 Zn finger 754..775 CDD:275368 6/20 (30%)
C2H2 Zn finger 780..801 CDD:275368 0/20 (0%)
C2H2 Zn finger 809..829 CDD:275368 6/19 (32%)
SUF4-like 852..>891 CDD:411020 15/40 (38%)
C2H2 Zn finger 864..885 CDD:411020 10/20 (50%)
C2H2 Zn finger 864..885 CDD:275368 10/20 (50%)
C2H2 Zn finger 891..917 CDD:275368 7/25 (28%)
zgc:171220NP_001103300.1 C2H2 Zn finger 66..87 CDD:275368 5/22 (23%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
COG5048 118..489 CDD:227381 124/489 (25%)
C2H2 Zn finger 123..143 CDD:275368 6/19 (32%)
C2H2 Zn finger 151..170 CDD:275368 6/18 (33%)
C2H2 Zn finger 179..199 CDD:275368 7/19 (37%)
C2H2 Zn finger 207..227 CDD:275368 9/20 (45%)
C2H2 Zn finger 235..255 CDD:275368 6/23 (26%)
C2H2 Zn finger 263..283 CDD:275368 6/21 (29%)
C2H2 Zn finger 291..311 CDD:275368 7/19 (37%)
C2H2 Zn finger 319..339 CDD:275368 8/33 (24%)
C2H2 Zn finger 347..367 CDD:275368 4/20 (20%)
C2H2 Zn finger 375..395 CDD:275368 6/46 (13%)
C2H2 Zn finger 403..423 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
C2H2 Zn finger 485..505 CDD:275368 7/25 (28%)

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