DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12917 and Sid

DIOPT Version :10

Sequence 1:NP_610558.2 Gene:CG12917 / 36065 FlyBaseID:FBgn0033490 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster


Alignment Length:393 Identity:109/393 - (27%)
Similarity:170/393 - (43%) Gaps:82/393 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DCSYITLFIYIYFICFLAWEVHGDCQI------LQYM-VEQSNGIFTYRDASGSIQLQRLETVPS 64
            |..|:...:.:|   |....|..:|.|      ..|: :.|:||::         .:||.:.|..
  Fly     3 DLKYMLTILSLY---FFVGSVQANCLIDLAHLNANYVYLSQNNGVY---------DIQRSDIVEI 55

  Fly    65 GVTLLVYCSPSVFKET-VCQDNGQFSVPLPMRCLSPMQPVTKHIRDGDCA--GNLYAVGYTIDGK 126
            ..||.:.|:..:.:.| :|:.:..||..|.....:|..||...:.|..|:  ...:|||::.:|:
  Fly    56 HQTLYLLCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSFNGR 120

  Fly   127 DLELYRTCFDCGQGRLVYSQSDVY----YKTFFPKRPFVEFVADEMFSPQEAAAYMKSNIYFAFK 187
            .:||||.|||   |..:..|..:|    |....| ||...:.:|::..                 
  Fly   121 FMELYRNCFD---GYSLAFQHSIYKAYRYVNTVP-RPNPTWQSDQLSG----------------- 164

  Fly   188 CIYGDDQSYLQNANYLVI-------------NRGHMVASADFLFTDQMGSTFRYLNVVPQFKSIN 239
               |.|.:|...|....:             :||||..::.|:.|:...|||||||.:||::.:|
  Fly   165 ---GFDNAYEGRATQACLLTNLGAVQPQCKFDRGHMTPASAFISTELKKSTFRYLNAIPQYRGVN 226

  Fly   240 DGNWEKIERWVRS--------------QIPKS-SYFRVKSGGIGI--LTLPDTRGFLQSAFLAGS 287
            .|.|:.:|.||.:              |||:: ...:|..|.:|:  |........:....|..:
  Fly   227 RGKWKAVETWVNNMVRGLYDNPIINNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNN 291

  Fly   288 KIPVPEWTYKAVRDATGNGLYVFLTYNSTFQMEKPPCLAICYPVNCPIHLPNNPND-GYTFCCDP 351
            |||||||.||.|...:|: .:|.||||......:.....||:.:.|...|..|..| |:|.||||
  Fly   292 KIPVPEWMYKIVSHLSGD-KWVMLTYNDVSLPNQQALNQICHVIPCHPGLNLNTKDVGHTVCCDP 355

  Fly   352 KRF 354
            .||
  Fly   356 YRF 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12917NP_610558.2 Endonuclease_NS 129..353 CDD:214889 76/258 (29%)
SidNP_651627.1 Endonuclease_NS 106..358 CDD:460120 80/276 (29%)

Return to query results.
Submit another query.