DRSC/TRiP Functional Genomics Resources

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Protein Alignment gem and grhl2

DIOPT Version :10

Sequence 1:NP_610556.1 Gene:gem / 36064 FlyBaseID:FBgn0050011 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_001011338.1 Gene:grhl2 / 496802 XenbaseID:XB-GENE-485995 Length:619 Species:Xenopus tropicalis


Alignment Length:535 Identity:121/535 - (22%)
Similarity:200/535 - (37%) Gaps:150/535 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 NSEESWTESSSLIEQITIVVDGQ---SKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIG-QSEN 215
            :.:|:|  .|.|...:|......   :.|......|.:...|......||.:..:.::.| :.::
 Frog    28 SEDEAW--KSYLENPLTAATKAMMSINGDEESAAAIGLLYDYYKVPREKRLLSLNKINEGHEDQD 90

  Fly   216 SPTASQSGDLPSKVAHQEKEKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLTT 280
            ......:.:.||.::..|......:        :..:...||.:...:|  |.|.:      .|:
 Frog    91 KRNCLPANETPSNLSTGENRVQVLK--------TVPVNLSLNNDTVESS--NREKY------TTS 139

  Fly   281 LKQEPQTDQIKPSPKVSLDNASASPSIAIAKLDE---VQNSPSQAISGQDSANGSGSAANGKHDV 342
            |.:.||     |:|      |||   :.:.|.:|   |..:||...           .::|:   
 Frog   140 LSESPQ-----PAP------ASA---VTVVKAEEFTPVFMAPSVPY-----------RSDGE--- 176

  Fly   343 NSGLACGCGSPQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGATHAEDHK---------- 397
                     .|:|     ..:|....|.....:..|..|.:..|...:|:.|..|          
 Frog   177 ---------EPRG-----VIFEQTHFGVHSITTHSDYLKDDQRSTPDSTYNESFKETTEKYRTPS 227

  Fly   398 ---------------FQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKI--LK 445
                           |||.|.|..|:..|..|..:||||:||.|.|.|.:.|....:|..|  ::
 Frog   228 VGTEEFLYEQTASSTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGANKCFRHPISKVR 292

  Fly   446 SVIKICFHERRLQFMEREQMQQW-----QQSRPGERIIEV-DVPLSYGLCHVSQPLSSGSLNTVE 504
            |||.:.|.|.:   ...||::.|     :|....:|:::: |...|:......:.:   :.|.|.
 Frog   293 SVIMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEI---AYNAVS 351

  Fly   505 IFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSATASGSGGSNNSAIASG 569
            ..||..:|..::|.|||:||:|:.:|  |.||:|..:||:||..|..|                 
 Frog   352 FTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS----------------- 397

  Fly   570 SGSSGSAAPASPERTPSAGSNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQP 634
                                  .:.:|.|.||||||..|||:||.: |.|:.|.|.:.:.:..|.
 Frog   398 ----------------------NKPIHRAYCQIKVFCDKGAERKIR-DEERKQNRKKGKSQAAQA 439

  Fly   635 SYECTIMNDISLDLV 649
              :|....|..|..|
 Frog   440 --QCNNSADGKLSAV 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gemNP_610556.1 CP2 393..627 CDD:461338 74/266 (28%)
SAM_CP2-like 739..805 CDD:188936
grhl2NP_001011338.1 Transcription activation. /evidence=ECO:0000250|UniProtKB:Q8K5C0 1..90 11/63 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..108 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..147 7/34 (21%)
CP2 224..433 CDD:461338 72/256 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..444 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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