Protein Alignment gem and ubp1

DIOPT Version :9

• Sequence 1: NP_610556.1
• Gene: gem / 36064
• FlyBaseID: FBgn0050011
• Length: 932
• Species: Drosophila melanogaster
• Sequence 2: XP_005159783.1
• Gene: ubp1 / 100136855
• ZFINID: ZDB-GENE-060503-870
• Length: 544
• Species: Danio rerio
• Alignment Length: 651
• Identity: 201/651 - (30%)
• Similarity: 324/651 - (49%)
• Gaps: 189/651 - (29%)

  Fly   340 HDVNSGLACGCGSPQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGATHAEDHKFQYILAA 404
            ||.::.|: |.|...|:    ..|.:::      :..|...|.|..|....:..::..|||::.|
Zfish    18 HDFDASLS-GIGQELGA----GAYSMSD------VLALPIFKQEDVSVPVESDTKNPPFQYVMCA 71

  Fly   405 ATSIATKNNEETLTYLNQGQSYEIKL---KKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQ 466
            |||.|.|.:|||||||||||||||::   :|.|::. ..:||:||::::.||:||||:||.:|::
Zfish    72 ATSPAVKLHEETLTYLNQGQSYEIRMLDNRKKGEMP-ELNKIVKSIVRVVFHDRRLQYMEHQQLE 135

  Fly   467 QWQQSRPGERIIEVDVPLSYGL----CHVSQPLSSGSLNTVEIFWDPLKEVGVYIKVNCISTEFT 527
            .|:.:|||:|::::|:|:|.|:    .|.||      ||..|..||..|...|:::|:|||||||
Zfish   136 GWKWNRPGDRLLDIDIPMSVGITEAQAHPSQ------LNAAEFLWDLSKRASVFVQVHCISTEFT 194

  Fly   528 PKKHGGEKGVPFRLQIETYIENTNSATASGSGGSNNSAIASGSGSSGSAAPASPERTPSAGSNGK 592
            |:|||||||||||:||:|:.::                      .||...
Zfish   195 PRKHGGEKGVPFRIQIDTFKQD----------------------ESGEYI--------------- 222

  Fly   593 QAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVM------- 650
            :.:|:|:|||||||.||||||.|.||||::||...|:||:||||:.||:::..|:.||
Zfish   223 EHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPQEKEKYQPSYDTTILSETRLEPVMEEVVELE 287

  Fly   651 -----------------SATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFAPSAASPATSSSPIAI 698
                             :.:..|..||     ||::               :..:|.|:::| ..
Zfish   288 LKKSSKRTLPADCGDSIAKSKRGSCSP-----WPDN---------------AYVNPITAATP-TF 331

  Fly   699 NSVTSTNSPTLKLMDATNMVSPQHVPADMDDYS--QNIMPESTPSQVTQWLTNHRLTAYLSTFAQ 761
            .|.|:|.|.:..:.|:.:. ||.| ..|:.:.:  :::.|.::.....:||..:|..:|...||.
Zfish   332 TSTTNTYSSSSTVPDSESS-SPNH-QGDLGNLTVVESLSPTASIQDTQKWLLKNRFNSYSRVFAH 394

  Fly   762 FSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASVDGCS---------------- 810
            |||:|::::::|||:||||.|||||::|.|:::.:.||||||.|::...
Zfish   395 FSGSDLLKLTREDLVQICGAADGIRLYNALKSRAVRPRLTLYVSLEASQSESPLLEKRGRSKNGE 459

  Fly   811 ---------YNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGAGGAATAAAAALFNNWGMH 866
                     |:|:||...||.||.:|:                       ::..|..|
Zfish   460 HSSPAAIPVYHALYLEEMTACELTRKI-----------------------SSVLALPL------- 494

  Fly   867 SKYSGSGSNIFNDANKSCVYISGPSGILVTITDEVLNNEIKDGSLYALEVQAGKVILKLINKQDN 931
                         .:.|.||..||:||.:.::|:::.|.:.:.|.          |:.:|....|
Zfish   495 -------------THISQVYKQGPTGIHILLSDQMVYNFLDESSF----------IISIIQDDSN 536

  Fly   932 N 932
            :
Zfish   537 D 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gem	NP_610556.1	CP2	393..624	CDD:282385	103/237 (43%)
		SAM_CP2-like	739..805	CDD:188936	30/65 (46%)
ubp1	XP_005159783.1	CP2	51..254	CDD:282385	104/246 (42%)
		SAM_superfamily	372..438	CDD:301707	30/65 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577679
Domainoid	1	1.000	181	1.000	Domainoid score	I3417
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	306	1.000	Inparanoid score	I2616
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001863
OrthoInspector	1	1.000	-	-		otm26580
orthoMCL	1	0.900	-	-		OOG6_104886
Panther	1	1.100	-	-	LDO	PTHR11037
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1220
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	11	10.890