DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pfk and pfk-1.2

DIOPT Version :9

Sequence 1:NP_001246234.1 Gene:Pfk / 36060 FlyBaseID:FBgn0003071 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_505457.1 Gene:pfk-1.2 / 179335 WormBaseID:WBGene00008230 Length:756 Species:Caenorhabditis elegans


Alignment Length:770 Identity:310/770 - (40%)
Similarity:443/770 - (57%) Gaps:46/770 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 KPFKDKGLAVFTSGGDSQGMNAAVRACVRMAIYLGCKVYFIREGYQGMVDGGDCIQEANWASVSS 239
            |..||.|:.|.||||||||||||||:.||..|..|.:.|.|||||.|:::|.  |:.|.||.|::
 Worm     6 KKGKDHGVGVLTSGGDSQGMNAAVRSVVRETIRQGHRCYLIREGYNGLINGN--IELAKWAHVAN 68

  Fly   240 IIHRGGTIIGSARCQDFRERQGRLKAANNLIQRGITNLVVIGGDGSLTGANLFRQEWSSLLDELV 304
            :.|.||::||::||.:||...||.|||..:..:.|.:|:||||||||.||...::||....:||.
 Worm    69 VTHLGGSMIGTSRCDEFRTTDGRKKAAAIMFDKRIFHLIVIGGDGSLMGAQKLKEEWGRFGEELF 133

  Fly   305 KNKTITTEQQEKFNVLHIVGLVGSIDNDFCGTDMTIGTDTALHRIIEAIDAISSTAYSHQRTFIM 369
            ....||.|...:...||:.|:|||||||...:|.:||:|||||||.||||.:..||.||||.|::
 Worm   134 AEGKITEEVANEGRELHLAGIVGSIDNDCIESDKSIGSDTALHRICEAIDGLVMTAQSHQRVFVV 198

  Fly   370 EVMGRHCGYLSVVAGIISEADYVFLPESPPQADWPDRLVLKLEQERSAGQRLNIVIVAEGAMDRE 434
            ||||||||||::.|.|..||||||.||.||...||::|..:|...|..|:|.|::|:.||..:.:
 Worm   199 EVMGRHCGYLALTAAIAVEADYVFYPEIPPDEKWPEQLCHQLGSVRKMGKRQNVIILGEGVTNSK 263

  Fly   435 GHPITAEDVKKVIDERLKHDARITVLGHVQRGGNPSAFDRILACRMGAEATLALMEATKD----- 494
            |..|....||:.|:.||:.:.||..|||:||||.||..||::..|||.||...:::..::     
 Worm   264 GQRIDVRQVKEEIETRLQLEVRIATLGHLQRGGAPSFLDRLIGLRMGYEAVQEVLKGKEEKEGAV 328

  Fly   495 -----SVPVVISLDGNQAVRVPLMECVERTQAVAKAMAEKRWADAVKLRGRSFERNLETY----- 549
                 ::..|:.|.|:...|..|...:.:|:...:.:.::....|.:|||..| .:.:||     
 Worm   329 VTGQKTIAKVMCLRGHNIQRNELSRVIRQTETANEEIMQRHSDLACRLRGFGF-LDKQTYLNFVS 392

  Fly   550 -KMLTRLKPPKENFDADGKGIEGYRLAVMHIGAPACGMNAAVRSFVRNAIYRGDVVYGINDGVEG 613
             .:.|.:....:.|            ||:|||:|..|||||..||.|.|.:.|..|.||..|.:|
 Worm   393 IPLSTTMPSRTKTF------------AVVHIGSPCAGMNAATYSFTRMANHSGIQVIGIKHGWDG 445

  Fly   614 LIAGNVRELGWSDVSGWVGQGGAYLGTKRTLPEGKFKEIAARLKEFKIQGLLIIGGFESYHAAGQ 678
            |...:|:.|.|::|.||...||:.|||||.|| .:...||..|....:.||:|||||.::.:|..
 Worm   446 LKNKDVKLLTWANVQGWAQFGGSMLGTKRQLP-SEMDLIAEGLNSNNVDGLVIIGGFMAFESALI 509

  Fly   679 IADQRDNYPQFCIPIVVIPSTISNNVPGTEFSLGCDTGLNEITEICDRIRQSAQGTKRRVFVIET 743
            :...|..|....|||||||:|||||.|||..|||.||.||||....|.|.|:|.|:|.:|.:|||
 Worm   510 LQQNRSEYTCLSIPIVVIPATISNNCPGTCMSLGVDTALNEICRQVDNISQNAIGSKNKVMIIET 574

  Fly   744 MGGYCGYLATLAGLAGGADAAYIYEEKFSIKDLQQDVYHMASKMAEG-VSRGLILRNEKAS-ENY 806
            ||...|:|||:..|:.|:..|.|.:.:.:.|||::.......::..| :.:.|::|:|.|| |.|
 Worm   575 MGSRSGFLATMTALSTGSQFALIRQVETNEKDLEKLAIETKERLDSGNLEKFLLIRSEGASDEIY 639

  Fly   807 STDFIYRLYSEEGKGLFTCRMNILGHMQQGGSPTPFDRNMGTKMAAKCVDWLAAQIKANIDANGV 871
            |.| :.:::.:..|..:..|:..||:.|.||.|:.|||.||.:|..:..:.:...:|.     |.
 Worm   640 SPD-VKKIFDKVMKNKYGVRITNLGYSQLGGHPSCFDRQMGIRMGVRAFEGIVNPVKM-----GD 698

  Fly   872 VNCKSPDTATLLGIVSRQYRFSPLVDLIAETNFDQRIPKKQWWLRLRPLLRILAK 926
            .:|      .::|:.....|:.|:..|..:..|:..:|...|||.|.||:..:.|
 Worm   699 RDC------CVIGLRGSSLRYVPVQGLGKKVCFEHGVPHNMWWLDLHPLVEAMTK 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PfkNP_001246234.1 PFK 178..914 CDD:294137 302/753 (40%)
6PF1K_euk 180..929 CDD:274152 307/765 (40%)
pfk-1.2NP_505457.1 PFK 8..747 CDD:294137 308/766 (40%)
6PF1K_euk 11..750 CDD:274152 307/765 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S685
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172878at2759
OrthoFinder 1 1.000 - - FOG0000489
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100319
Panther 1 1.100 - - O PTHR13697
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X474
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.730

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